Table 1 LC-HDMSE data parameters of peptide ions containing cysteines 112 and 146.

From: The dual roles of RPE65 S-palmitoylation in membrane association and visual cycle function

Peptide

Modifications

m/z

Charge

Retention time (min)

Max fold change (+HAM/−HAM)

Highest mean condition

Lowest mean condition

Normalized Abundance (+HAM)

Normalized Abundance (−HAM)

Anova (p)

IVITEFGTC106AFPDPC112K

NEM; 4-VP

657.65

3

58.036

8.18

+HAM

−HAM

1808.2

220.9

0.03722

IVITEFGTC106AFPDPC112K

NEM; NEM

995.97

2

64.397

6.77

+HAM

−HAM

17756

2619.9

0.00260

GVEVTDNALVNIYPVGEDYYAC146TETNFITK

4-VP

887.93

4

57.43

13.3

+HAM

−HAM

3426.9

256.8

0.00832

GVEVTDNALVNIYPVGEDYYAC146TETNFITK

NEM

1154.2

3

64.088

1.45

+HAM

−HAM

11785.5

8116.9

0.374*

  1. Cysteine residues are underlined, with superscript number showing residue position. 4-VP modification on cysteine indicates palmitoylation. This data was excerpted from Supplementary Dataset 1.
  2. *Not significant.
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