Table 1 Proteins whose binding to the IGFBPL1-171 bait was enhanced by EGFP-CPN.

From: Lysine-specific demethylase 2A enhances binding of various nuclear factors to CpG-rich genomic DNAs by action of its CXXC-PHD domain

Transcription of the rRNA, the RNA processing, and ribosome synthesis

   POLR1A (8), POLR1B (10), CD3EAP (2.7), TAF1A (5), TAF1B (2), TAF1C (3.5), TOP3B (2.8), TDRD3 (5), UTP15 (3), NOL11 (2), NOP2 (3), GNL3L (3), FTSJ3 (3.5), WDR36 (3), PWP2 (2.3), RPS8 (3), NOP2 (3), AGO2 (2)

Chromosome maintenance, congression, segregation, and mitosis

   KIF18A (9), KIF23 (10), KIF2C (3), KIFC1 (2.7), MARK2 (4), PCID2 (3), CLASP1 (4), TPX2 (>5), KNSTRN (2), CENPQ (2), MBD3 (3), CEP170 (2), CHD3 (2.3), ARPC2 (2.5)

Replication, cell cycle, and cell proliferation marker

   ORC3 (2), ORC4 (2), LRWD1 (1.8), CDC45 (4), BBX (5), MKI67 (3)

Gene silencing, gene activating, or transcription elongation

   MBD3 (3), ZNF629 (>4), ZNF668 (>5), TCEB3 (4)

DNA repair

   DDB2 (3), EPC2 (>4)

RNA binding

   RBM27 (>4), WDR3 (2.3), ZC3H14 (4)

Cancer cell invasion and metastasis

   DBN1 (3), PKN3 (>10), MPRIP (6)

Miscellaneous

   KIAA0020 (3), NUFIP2 (4), TTC13 (3), TTF2 (3.5), XDH (>4), VDAC2 (2.5)

  1. The number in parenthesis indicates enhancement factor (amount of protein bound with EGFP-CPN-containing nuclear extract/amount of the protein bound with EGFP-NLSR-containing nuclear extract). The mark > is used when protein of the control nuclear extracts did not bind to the bait at all. IGFBPL1-171 and each nuclear extract were incubated for 10 min at room temperature.
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