Table 1 List of constructs used in this study.

From: The human HOXA9 protein uses paralog-specific residues of the homeodomain to interact with TALE-class cofactors

Constructs

Mutations

VNHOXA9

 

VNHOXA9 HX

W → A

VNHOXA9 DN187

 

VNHOXA9 DN187HX

W → A

VNHOXA9 HDA1

 

VNHOXA9HX HDA1

W → A

VNHOXA1 HDA9

 

VNHOXA1HX HDA9

FDWM → FAAA

VNHOXA1HX HDA9D29M56

W → A HD: LTRDRR → LTRARR RMKMKKIN → RMKWKKIN

VNHOXA9 K4A

HD: TRKKRCPYT → TRKARCPYT

VNHOXA9 HX K4A

W → A HD: TRKKRCPYT → TRKARCPYT

VNHOXA9 C6Q

HD: TRKKRCPYT → TRKKRQPYT

VNHOXA9 HX C6Q

W → A HD: TRKKRCPYT → TRKKRQPYT

VNHOXA9 P7G

HD: TRKKRCPYT → TRKKRCGYT

VNHOXA9 HX P7G

W → A HD: TRKKRCPYT → TRKKRCGYT

VNHOXA9 M24R

HD: FNMYLTRDRR → FNRYLTRDRR

VNHOXA9 M24R W

W → A HD: FNMYLTRDRR → FNRYLTRDRR

VNHOXA9 D29A

HD: FNMYLTRDRR → FNMYLTRARR

VNHOXA9 HX D29A

W → A HD: FNMYLTRDRR → FNMYLTRARR

VNHOXA9 M56W

HD: RMKMKKIN → RMKWKKIN

VNHOXA9 HX M56W

W → A HD: RMKMKKIN → RMKWKKIN

VNHOXA9 D29AM56W

HD: LTRDRR → LTRARR RMKMKKIN → RMKWKKIN

VNHOXA9 HX D29AM56W

W → A HD: LTRDRR → LTRARR RMKMKKIN → RMKWKKIN

PBX1

 

CCPBX1

 

PBX1 54

 HD: Q -> A

CCPBX1 54

HD: Q → A

PBX1 PYP

 HD: PYP → AAA

CCPBX1 PYP

HD: PYP → AAA

MEIS1a

 
  1. Residues resulting from the mutation are highlighted in italic. HD denotes residues of the homeodomain.