Table 1 Keystones nodes obtained from the network analysis for surface (A), subsurface (B) and deep (C) sediment across each ‘Fraction’ considering the highest level of node degree distribution, closeness centrality and betweenness centrality.
From: The role of fungi in heterogeneous sediment microbial networks
Fraction | Kingdom | Lowest taxa | Betweenness Centrality | Closeness Centrality | Degree |
|---|---|---|---|---|---|
S1 | Fungi | Trichocomaceae | 0.863 | 0.427 | 207 |
Fungi | Unidentified | 0.030 | 0.278 | 64 | |
Bacteria | Pelobacteraceae | 0.084 | 0.257 | 53 | |
Fungi | Lyophyllum | 0.005 | 0.268 | 49 | |
Fungi | Unidentified | 0.069 | 0.332 | 46 | |
Fungi | Unidentified | 0.005 | 0.267 | 43 | |
Fungi | Ascomycota | 0.004 | 0.267 | 42 | |
Archaea | Crenarchaeota | 0.125 | 0.259 | 41 | |
Archaea | YLA114 | 0.106 | 0.259 | 37 | |
Fungi | Onygenaceae | 0.007 | 0.322 | 35 | |
S2 | Fungi | Unidentified | 0.472 | 0.272 | 90 |
Fungi | Sordariomycetes | 0.308 | 0.260 | 88 | |
Bacteria | Thermomicrobia | 0.115 | 0.229 | 71 | |
Bacteria | Marinobacter | 0.110 | 0.229 | 70 | |
Fungi | Ascomycota | 0.075 | 0.245 | 58 | |
Fungi | Unidentified | 0.053 | 0.238 | 45 | |
Fungi | Unidentified | 0.042 | 0.237 | 39 | |
Fungi | Aureobasidium | 0.025 | 0.236 | 36 | |
Fungi | Ascomycota | 0.015 | 0.236 | 36 | |
Fungi | Onygenaceae | 0.012 | 0.231 | 32 | |
S3 | Fungi | Sordariomycetes | 0.741 | 0.481 | 149 |
Bacteria | Anaerolineae | 0.120 | 0.321 | 59 | |
Archaea | Parvarchae | 0.095 | 0.318 | 55 | |
Fungi | Botryosphaeriaceae | 0.203 | 0.401 | 46 | |
Fungi | Sordariomycetes | 0.039 | 0.382 | 44 | |
Fungi | Talaromyces | 0.025 | 0.328 | 43 | |
Fungi | Dothideomycetes | 0.028 | 0.378 | 39 | |
Fungi | Orpinomyces | 0.008 | 0.367 | 27 | |
Fungi | Pleosporales | 0.006 | 0.316 | 26 | |
Fungi | Dothideomycetes | 0.005 | 0.366 | 25 | |
S4 | Fungi | Sordariomycetes | 0.704 | 0.399 | 176 |
Fungi | Unidentified | 0.037 | 0.281 | 69 | |
Fungi | Mycosphaerella | 0.141 | 0.323 | 68 | |
Fungi | Cladophialophora | 0.046 | 0.310 | 56 | |
Fungi | Sordariomycetes | 0.031 | 0.330 | 56 | |
Fungi | Talaromyces | 0.030 | 0.289 | 42 | |
Bacteria | Desulfobulbaceae | 0.059 | 0.255 | 41 | |
Fungi | Nigrospora | 0.025 | 0.297 | 39 | |
Fungi | Ascomycota | 0.027 | 0.298 | 38 | |
Fungi | Dothideomycetes | 0.014 | 0.325 | 36 | |
BS | Fungi | Unidentified | 0.261 | 0.279 | 75 |
Bacteria | Bacteroidales | 0.218 | 0.247 | 75 | |
Archaea | Halobacteriaceae | 0.149 | 0.272 | 45 | |
Fungi | Tremellomycetes | 0.194 | 0.317 | 42 | |
Fungi | Sordariomycetes | 0.108 | 0.283 | 42 | |
Fungi | Nigrospora | 0.094 | 0.274 | 38 | |
Fungi | Unidentified | 0.027 | 0.280 | 36 | |
Fungi | Onygenaceae | 0.136 | 0.308 | 34 | |
Fungi | Ascomycota | 0.118 | 0.286 | 32 | |
Bacteria | Flammeovirgaceae | 0.089 | 0.154 | 32 | |
SS1 | Fungi | Unidentified | 0.828 | 0.399 | 405 |
Fungi | Sordariomycetes | 0.059 | 0.325 | 47 | |
Fungi | Unidentified | 0.211 | 0.348 | 40 | |
Fungi | Saccharomycetales | 0.024 | 0.323 | 40 | |
Fungi | Ascomycota | 0.056 | 0.337 | 35 | |
Fungi | Trichosphaeriales | 0.060 | 0.337 | 32 | |
Archaea | Cenarchaeaceae | 0.006 | 0.319 | 28 | |
Fungi | Harknessia | 0.014 | 0.322 | 27 | |
Fungi | Massarina | 0.010 | 0.323 | 22 | |
Archaea | YLA114 | 0.004 | 0.318 | 22 | |
SS2 | Fungi | Unidentified | 0.168 | 0.353 | 72 |
Bacteria | Chromatiales | 0.252 | 0.306 | 62 | |
Fungi | Pluteus | 0.192 | 0.386 | 60 | |
Fungi | Unidentified | 0.115 | 0.360 | 60 | |
Fungi | Harknessia | 0.061 | 0.370 | 53 | |
Fungi | Dothideomycetes | 0.041 | 0.367 | 47 | |
Bacteria | Candidatus Entotheonella | 0.109 | 0.301 | 45 | |
Fungi | Unidentified | 0.082 | 0.368 | 45 | |
Fungi | Ascomycota | 0.052 | 0.347 | 42 | |
Archaea | Candidatus Nitrososphaera | 0.070 | 0.292 | 37 | |
SS3 | Fungi | Antrodia | 0.315 | 0.341 | 88 |
Bacteria | Rhizobiales | 0.296 | 0.284 | 80 | |
Fungi | Unidentified | 0.329 | 0.338 | 67 | |
Fungi | Ascomycota | 0.035 | 0.291 | 49 | |
Fungi | Mycosphaerellaceae | 0.049 | 0.303 | 43 | |
Fungi | Unidentified | 0.048 | 0.304 | 43 | |
Fungi | Saccharomyces | 0.046 | 0.302 | 38 | |
Fungi | Pleosporales | 0.052 | 0.301 | 37 | |
Fungi | Unidentified | 0.049 | 0.301 | 35 | |
Fungi | Myrothecium | 0.039 | 0.299 | 32 | |
SS4 | Bacteria | Chloroflexi | 0.410 | 0.246 | 120 |
Fungi | Unidentified | 0.385 | 0.292 | 65 | |
Fungi | Unidentified | 0.048 | 0.262 | 55 | |
Fungi | Ascomycota | 0.047 | 0.261 | 52 | |
Fungi | Hypocreales | 0.037 | 0.261 | 51 | |
Fungi | Unidentified | 0.182 | 0.277 | 47 | |
Fungi | Ascomycota | 0.027 | 0.259 | 44 | |
Fungi | Penicillium | 0.020 | 0.256 | 39 | |
Fungi | Stictidaceae | 0.018 | 0.255 | 38 | |
Fungi | Pleosporales | 0.076 | 0.272 | 33 | |
BSS | Bacteria | Myxococcales | 0.249 | 0.266 | 82 |
Fungi | Ascomycota | 0.145 | 0.293 | 82 | |
Fungi | Unidentified | 0.461 | 0.323 | 75 | |
Fungi | Saccharomycetaceae | 0.057 | 0.282 | 68 | |
Fungi | Saccharomycetales | 0.052 | 0.286 | 64 | |
Fungi | Ascomycota | 0.037 | 0.284 | 55 | |
Fungi | Dothideomycetes | 0.037 | 0.283 | 53 | |
Fungi | Ascomycota | 0.037 | 0.278 | 50 | |
Fungi | Ascomycota | 0.011 | 0.269 | 40 | |
Fungi | Talaromyces | 0.019 | 0.280 | 37 | |
D1 | Fungi | Unidentified | 0.816 | 0.452 | 320 |
Fungi | Dothideomycetes | 0.260 | 0.376 | 92 | |
Bacteria | Piscirickettsiaceae | 0.074 | 0.284 | 45 | |
Fungi | Sordariomycetes | 0.017 | 0.355 | 42 | |
Fungi | Sordariomycetes | 0.066 | 0.351 | 39 | |
Fungi | Kotlabaea | 0.029 | 0.348 | 35 | |
Fungi | Acremonium | 0.007 | 0.271 | 31 | |
Fungi | Unidentified | 0.010 | 0.346 | 28 | |
Fungi | Onygenaceae | 0.008 | 0.345 | 25 | |
Archaea | Cenarchaeaceae | 0.001 | 0.262 | 25 | |
D2 | Fungi | Nigrospora | 0.685 | 0.442 | 105 |
Archaea | Cenarchaeaceae | 0.267 | 0.383 | 49 | |
Bacteria | Deltaproteobacteria | 0.172 | 0.359 | 46 | |
Archaea | Crenarchaeota | 0.124 | 0.326 | 34 | |
Fungi | Unidentified | 0.166 | 0.257 | 30 | |
Fungi | Unidentified | 0.018 | 0.315 | 21 | |
Archaea | Crenarchaeota | 0.007 | 0.331 | 21 | |
Bacteria | Fulvivirga | 0.066 | 0.274 | 19 | |
Archaea | Crenarchaeota | 0.033 | 0.339 | 19 | |
Archaea | Crenarchaeota | 0.037 | 0.343 | 18 | |
D3 | Fungi | Hypocreales | 0.264 | 0.283 | 92 |
Fungi | Abundisporus | 0.178 | 0.274 | 88 | |
Fungi | Teratosphaeriaceae | 0.154 | 0.272 | 86 | |
Bacteria | Desulfobacteraceae | 0.172 | 0.218 | 67 | |
Fungi | Ascomycota | 0.033 | 0.260 | 50 | |
Bacteria | Unidentified | 0.163 | 0.211 | 45 | |
Fungi | Botryosphaeria | 0.224 | 0.255 | 41 | |
Fungi | Diatrypaceae | 0.018 | 0.258 | 38 | |
Bacteria | Chloroflexi | 0.069 | 0.253 | 32 | |
Fungi | Dothideomycetes | 0.017 | 0.244 | 31 | |
D4 | Fungi | Pleosporaceae | 0.522 | 0.319 | 141 |
Fungi | Unidentified | 0.109 | 0.303 | 81 | |
Fungi | Hypocreales | 0.060 | 0.297 | 73 | |
Fungi | Basidiomycota | 0.046 | 0.295 | 64 | |
Fungi | Unidentified | 0.044 | 0.295 | 64 | |
Fungi | Unidentified | 0.044 | 0.294 | 60 | |
Bacteria | Hyphomonadaceae | 0.227 | 0.197 | 34 | |
Fungi | Sordariomycetes | 0.039 | 0.286 | 33 | |
Fungi | Phyllosticta | 0.065 | 0.272 | 29 | |
Fungi | Abundisporus | 0.007 | 0.275 | 26 | |
BD | Fungi | Ascomycota | 0.859 | 0.468 | 428 |
Fungi | Teratosphaeriaceae | 0.041 | 0.267 | 87 | |
Archaea | Nitrosopumilus | 0.040 | 0.286 | 37 | |
Archaea | Cenarchaeaceae | 0.033 | 0.281 | 37 | |
Bacteria | Piscirickettsiaceae | 0.047 | 0.238 | 36 | |
Bacteria | Candidatus Portiera | 0.057 | 0.273 | 35 | |
Archaea | Cenarchaeaceae | 0.044 | 0.241 | 34 | |
Bacteria | Desulfuromonadales | 0.010 | 0.280 | 33 | |
Fungi | Phyllosticta | 0.026 | 0.332 | 32 | |
Archaea | Parvarchaea | 0.022 | 0.223 | 30 |