Table 4 Selected differentially expressed phytohormone-related genes in Sw-7 compared to the S-line after TSWV inoculation.
S. lycopersicum Accession | Annotationa | 4 dpi | 7 dpi | 14 dpi | 21 dpi | 35 dpi |
|---|---|---|---|---|---|---|
Cytokinin Pathway | ||||||
Solyc04g016200 | CK-O-glucoside biosynthesis | — | — | — | −2.556 | — |
Solyc10g079930 | CK-O-glucoside biosynthesis | — | — | −2.837 | — | — |
Ethylene biosynthesis Pathway | ||||||
Solyc00g095860 | ET biosynthesis | — | — | — | −3.322 | — |
Solyc01g095080 | ET biosynthesis | — | — | — | −6.644 | — |
Solyc08g081550 | ET biosynthesis | — | — | — | −3.184 | — |
Solyc09g010000 | ET biosynthesis | — | — | — | −3.474 | — |
Solyc09g089580 | ET biosynthesis | — | — | — | −2.474 | — |
Geranylgeranyl Pyrophosphate Synthase Pathway | ||||||
Solyc04g079960 | geranylgeranyldiphosphate biosynthesis | — | — | — | 1.541 | 1.727 |
Gibberellin, IAA Pathways | ||||||
Solyc03g006880 | gibberellin biosynthesis | — | — | — | 1.832 | — |
Solyc11g072310 | gibberellin biosynthesis) | — | — | — | −1.888 | — |
Solyc11g011210 | Gibberellin regulated protein | — | — | — | −4.059 | — |
Solyc06g007890 | Gibberellin regulated protein | — | — | — | 2.384 | — |
Solyc12g042520 | Gibberellin-regulated family protein | — | — | — | −2.737 | — |
Solyc06g008870 | GID1-like gibberellin receptor | — | — | — | −2.837 | — |
Solyc08g068480 | IAA-amido synthetase GH3.8 | — | — | — | 1.787 | — |
Solyc01g107400 | IAA-amido synthetase GH3.8 | — | — | — | — | — |
Solyc08g068490 | IAA-amido synthetase GH3.8 | — | — | — | 1.761 | −4.644 |
Solyc07g043590 | IAA biosynthesis I | — | — | — | −1.889 | — |
Solyc06g073060 | IAA biosynthesis II | — | — | — | −2.059 | — |
Lipoxygenase Pathway | ||||||
Solyc01g099160 | jasmonic acid biosynthesis | — | — | — | −4.059 | −2.644 |
Solyc01g099170 | jasmonic acid biosynthesis | — | — | — | −4.059 | −2.737 |
Solyc03g122340 | jasmonic acid biosynthesis | — | — | — | −2.644 | — |
Solyc09g075860 | jasmonic acid biosynthesis | — | — | — | −1.943 | — |
Solyc12g011040 | jasmonic acid biosynthesis | — | — | — | −6.644 | — |
Phenylpropanoid Pathway | ||||||
Solyc02g079490 | phenylpropanoid biosynthesis | — | — | — | — | 1.687 |
Solyc02g093270 | phenylpropanoid biosynthesis | — | — | −2.556 | — | — |
Solyc04g063210 | phenylpropanoid biosynthesis | — | — | — | −3.644 | — |
Solyc06g074710 | phenylpropanoid biosynthesis | — | — | — | — | 1.727 |
Solyc09g082660 | phenylpropanoid biosynthesis | — | — | — | — | −3.837 |
Solyc11g071470 | phenylpropanoid biosynthesis | — | — | — | — | −4.644 |
Solyc11g071480 | phenylpropanoid biosynthesis | — | — | — | — | −4.322 |
Beta-carotenehydroxylase Pathway | ||||||
Solyc03g007960 | lutein biosynthesis | — | — | — | — | −2.737 |
Solyc03g007960 | zeaxanthin biosynthesis | — | — | — | — | −2.737 |
Other Auxin Pathway Genes | ||||||
Solyc01g110770 | Auxin-induced SAUR-like protein | — | — | — | 1.795 | — |
Solyc11g011700 | Auxin-induced SAUR-like protein | — | — | — | 1.868 | — |
Solyc11g011680 | Auxin-induced SAUR-like protein | — | — | — | 2.101 | — |
Solyc04g052970 | Auxin-induced SAUR-like protein | — | — | — | 8.395 | — |
Solyc12g005310 | Auxin-responsive GH3-like | — | — | — | 1.604 | — |
Solyc03g082530 | Auxin-responsive family protein | — | — | — | −6.644 | — |
Solyc11g011710 | Auxin-responsive protein | — | — | — | 2.928 | — |
