Table 1 Co-infection with up to three HA subtypes detected in poultry samples from Tangail but not from Mymensingh district, Bangladesh, by use of arrayed subtype-specific RT-qPCRs (RITA, 23).

From: Co-subsistence of avian influenza virus subtypes of low and high pathogenicity in Bangladesh: Challenges for diagnosis, risk assessment and control

Sample

Origin

M

H5

H7

H9

N1

N2

A/layer chicken/BD/VP02/2016

Tangail

13.07

19.4

27.1

14.24

20.46

14.35

A/layer chicken/BD/VP03/2016

Tangail

16.38

17.45

29.82

19.03

18.19

19.26

A/layer chicken/BD/VP04/2016

Tangail

16.34

19.71

Neg

17.17

19.72

18.39

A/layer chicken/BD/VP05/2016

Tangail

30.25

31.86

Neg

34.54

32.3

32.32

A/duck/BD/VP06/2016

Tangail

15.57

17.69

18.91

19.86

17.55

17.61

A/chicken/BD/C1/2016

Mymensingh

20.23

13.24

Neg

Neg

14.04

Neg

A/duck/BD/D1/2016

Mymensingh

18.02

16.82

Neg

Neg

17.28

Neg

  1. The results are presented as RT-qPCR Cq values; Neg – Cq > 40.