Table 4 List of F. circinatum diagnostic protocols assessed during the collaborative study.

p1

Ramsfield et al.²³

Two independent sequence characterized amplified regions (SCAR)

End-point PCR

p2

Ioos et al.²⁴

rDNA Intergenic spacer (IGS)

Real-time PCR with hydrolysis probe

p3

Lamarche et al.²⁷

rDNA Intergenic spacer (IGS)

Real-time PCR with hydrolysis probe

p4

Schweigkofler et al.²²

rDNA Intergenic spacer (IGS)

Real-time PCR with SYBR Green staining

p5

Fourie et al.²⁶

rDNA Intergenic spacer (IGS)

Real-time PCR with SYBR Green staining

p6

Dreaden et al.²⁵

rDNA Intergenic spacer (IGS)

Real-time PCR with SYBR Green staining

p7

Luchi et al.²⁸

Translation elongation factor 1-alpha gene (TEF)

Real-time PCR with hydrolysis probe

p8

Baskarathevan et al. (Supplementary Information 1)

Sequence characterized amplified region (SCAR)

Real-time PCR with hydrolysis probe

p9

EPPO¹³, appendix 4

rDNA Intergenic spacer (IGS)

End-point PCR