Table 1 List of patient blood and in vitro B cells infected with EBV gene expression datasets selected in this study, and the number of samples and DEGs in each dataset.
Dataset | Phenotype | Cell type | PMID | Platform | Samples | DEGs | ||
|---|---|---|---|---|---|---|---|---|
Cases | Controls | Outliers | ||||||
GSE63063 | Alzheimer’s Disease | Whole Blood | 26343147 | Illumina | 134 | 132 | 6 | 906 |
GSE99039 | Parkinson’s Disease | Whole Blood | 28916538 | Affymetrix | 204 | 232 | 2 | 939 |
GSE81246 | CMV host response | PBMCs | 28031361 | Affymetrix | 10 | 24 | 0 | 1910 |
GSE20200 | EBV host response | B cells | 21147465 | Exon Array | 4 | 4 | 0 | 1491 |
GSE45829 | EBV host response | B cells | 23724103 | Exon Array | 3 | 3 | 0 | 8589 |
GSE40396 | HHV6 host response | Whole Blood | 23858444 | Illumina | 10 | 22 | 0 | 545 |
