Table 1 Statistics of the four germplasms sequencing.

From: Genome-wide analysis of genetic variations between dominant and recessive NILs of glanded and glandless cottons

Sample

Raw Base (bp)

Clean Base (bp)

Effective Rate (%)

Error Rate (%)

Q20 (%)

Q30 (%)

GC Content (%)

Coker312

85,686,024,300

85,433,099,700

99.70

0.03

96.45

91.47

38.36

Coker312W

84,282,812,700

83,971,926,000

99.63

0.03

96.44

91.36

39.22

CCRI12

79,846,896,900

79530271800

99.60

0.03

95.57

89.70

39.42

CCRI12W

88,879,908,600

88469693100

99.54

0.03

96.95

92.65

38.88

  1. Summary of sequencing data quality.
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