Table 3 SNPs and indels among the mitogenomes of the 19 resequenced strains aligned with L135.

Population type	Strain	CDS		Intron		Intergenic region		Total
Population type	Strain	SNPs	InDels	SNPs	InDels	SNPs	InDels	SNPs	InDels
A1	Cr01	27	6	21	4	97	25	145	35
	EFISAAS5143	19	5	18	1	132	23	169	29
	EFISAAS5146	23	5	19	1	115	34	157	40
	L808	16	3	8	1	85	21	109	25
	Average	21	4	16	1	107	25	145Bb	32Bc
A2	EFISAAS5052	23	9	25	6	179	42	227	57
	EFISAAS5053	27	7	20	2	169	48	216	57
	EFISAAS5054	27	7	21	2	172	42	220	51
	Guangxiang No.9	26	8	22	3	180	42	228	53
	Average	25	7	22	3	175	43	222Bb	54Bb
B	EFISAAS0376	150	17	206	30	638	126	994	173
	EFISAAS5145	142	14	223	37	668	133	1033	184
	YAASM296	145	15	203	29	609	124	957	168
	YAASM298	134	15	219	34	546	114	899	163
	YAASM300	143	14	211	38	614	126	968	178
	YAASM301	139	15	216	33	663	123	1018	171
	YAASM359	143	14	197	29	678	140	1018	183
	YAASM363	136	12	211	31	644	131	991	174
	YAASM1515	152	15	219	40	662	133	1033	188
	YAASM2321	147	15	228	33	729	149	1104	197
	YAASM2323	151	16	202	34	482	96	835	146
	Average	143	14	212	33	630	126	986Aa	175Aa

Notes: The different capital letters indicate significant differences at the 0.01 level, and the different lowercase letters indicate significant differences at the 0.05 level.

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