Table 5 Statistical results of DEGs annotations.

From: Transcriptome and digital gene expression analysis unravels the novel mechanism of early flowering in Angelica sinensis

ID

Gene name

ZT1/ZC

ZT2/ZC

Ratio

P value

Ratio

P value

CL5543.Contig2_DGT

The Photoperiodic pathway

PHYOCHROME A(PHYA)

2.02↑

3.17E-05

2.05↑

2.12E-05

CL7271.Contig2_DGT

CONSTANS(CO)

7.96↑

0.120782

8.64↑

0.033365

Unigene41197_DGT

FLOWERING LOCUS T(FT)

8.81↑

0.059875

→

→

CL4589.Contig2_DGT

GIGANTEA(GI)

3.46↑

0.491492

4.41↑

0.258322

CL5603.Contig3_DGT

PHYOCHROME B(PHYB)

−5.34↓

0.508582

0.97↑

0.641554

CL311.Contig3_DGT

EARLY FLOWERING 4(ELF4)

−1.78↓

2.57E-08

−1.65↓

8.86E-08

CL2028.Contig5_DGT

The vernalization pathway

FLOWERING LOCUS C(FLC)

6.14↑

0.243646

→

→

CL2088.Contig1_DGT

FRIGIDA(FRI)

6.72↑

0.491492

8.25↑

0.130579

Unigene3151_DGT

VERNALIZATION 1(VRN1)

9.57↑

3.95E-07

9.76↑

3.96E-08

CL582.Contig3_DGT

VERNALIZATION INSENSITIVE 3(VIN3)

6.42↑

0.029682

6.37↑

0.033365

CL7283.Contig1_DGT

SUPPRESSOR OF OVEREXPRESSION OF CO 1(SOC1)

−7.86↓

4.08E-69

−4.60↓

7.50E-59

CL4574.Contig4_DGT

AGAMOUS

12.38↑

7.98E-71

13.23↑

2.01E-128

Unigene30906_DGT

The autonomous pathway

FCA

−1.33↓

0.00178

0.87↑

0.0577016

Unigene7256_DGT

FPA

→

→

→

→

Unigene13101_DGT

FLOWERING TIME CONTROL PROTEIN(FY)

→

→

→

→

CL1798.Contig6_DGT

FVE

→

→

→

→

CL1178.Contig2_DGT

The gibberellin pathway

gibberellin 3beta-hydroxylase2

9.27↑

0.000218

8.80↑

0.002178

CL9718.Contig2_DGT

gibberellin 20-oxidase

→

→

→

→

Unigene30596_DGT

LEAFY

9.87↑

5.25E-12

8.42↑

7.19E-05

Unigene35571_DGT

Inhibit gene

TFL1

8.55↑

0.059875

→

→

CL8673.Contig1_DGT

CLF

4.26↑

0.243646

→

→

  1. ↑: up-regulated, ↓: down-regulated, → : no difference.