Figure 2 | Scientific Reports

Figure 2

From: Genome and plasmid diversity of Extended-Spectrum β-Lactamase-producing Escherichia coli ST131 – tracking phylogenetic trajectories with Bayesian inference

Figure 2

Chromosomal and plasmid differences in identified Swedish transmission clusters, in clade A (A_TC), C1 (C1_TC) and C2 (C2_TC). Data included for each strain are; place of isolation (country and city), pairwise SNP differences on chromosomal level (chromosomal SNP), percentage aligned bases between blaCTX-M plasmids and a reference plasmid (% aligned bases to reference) and blaCTX-M plasmid SNP differences to reference plasmid (No. SNPs to reference). Reference plasmid for clade A_TC GenBank: HG530657.1 (size:111,741 bp) and clade C1_TC GenBank: CP021871.1 (size 134,899 bp). For C2_TC an internal reference plasmid (B1316-PB_2011, size: 101,922 bp) was used. NA = non applicable, UK = United Kingdom, NZ = New Zealand.

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