Table 3 List of secondary metabolite biosynthetic gene clusters in the S. rochei chromosome.
Clustera | Product type | Location | Length (bp) | Possible metabolites |
|---|---|---|---|---|
1 | PKS-NRPS | SRO_0155-SRO_0157 | 12,171 | |
2 | Siderophore | SRO_0365-SRO_0370 | 8,474 | |
3 | Terpene | SRO_0471-SRO_0472 | 2,153 | 2-Methylisoborneol |
4 | PKS-NRPS | SRO_0501-SRO_0517 | 49,191 | |
5 | PKS | SRO_0730-SRO_0739 | 15,137 | |
6 | Lantipeptide-NRPS | SRO_0832-SRO_0848 | 34,433 | |
7 | PKS-NRPS | SRO_1003-SRO_1008 | 13,813 | |
8 | NRPS-Lantipeptide | SRO_1184-SRO_1189 | 11,055 | |
9 | Terpene | SRO_1200-SRO_1204 | 6,711 | Hopene |
10 | NRPS | SRO_1300-SRO_1346 | 70,044 | |
11 | NRPS | SRO_1551-SRO_1557 | 21,989 | |
12 | PKS-NRPS | SRO_1613-SRO_1615 | 11,979 | |
13 | Terpene | SRO_1735-SRO_1737 | 4,337 | Geosmin |
14 | Azoxyalkene and type I PKS | SRO_1819-SRO_1850 | 36,010 | KA57-A |
15 | Siderophore | SRO_2036-SRO_2038 | 4,744 | |
16 | NRPS | SRO_2051-SRO_2053 | 5,458 | |
17 | NRPS | SRO_2500-SRO_2506 | 9,881 | |
18 | Terpene | SRO_2585-SRO_2586 | 2,410 | Albaflavenone |
19 | Butyrolactone | SRO_3382 | 932 | |
20 | NRPS-Lantipeptide | SRO_3845-SRO_3849 | 6,875 | |
21 | Type II PKS | SRO_4037-SRO_4044 | 7,077 | Spore pigment |
22 | Siderophore | SRO_4684-SRO_4688 | 5,997 | |
23 | Melanin | SRO_4761-SRO_4762 | 1,446 | Melanin |
24 | Ectoine | SRO_5592-SRO_5595 | 3,165 | 5-Hydroxyectoine |
25 | Type I PKS | SRO_6166-SRO_6168 | 12,248 | |
26 | Type III PKS | SRO_6250-SRO_6251 | 2,284 | |
27 | NRPS | SRO_6287-SRO_6291 | 9,037 | |
28 | NRPS | SRO_6304-SRO_6312 | 46,390 | |
29 | Type I PKS (Iterative) | SRO_6377-SRO_6381 | 12,789 | |
30 | Pseudosugar | SRO_6636-SRO_6646 | 12,173 | |
31 | NRPS | SRO_7209-SRO_7215 | 44,813 | |
32 | Type I PKS | SRO_7221-SRO_7235 | 81,482 | Pentamycin |
33 | Type I PKS (Iterative) | SRO_7329-SRO_7331 | 9,456 | |
34 | NRPS | SRO_7379-SRO_7381 | 3,029 | |
35 | Terpene | SRO_7452-SRO_7458 | 8,979 | Carotenoid |
