Table 1 General statistics of L. theobromae LA-SOL3 genome assembly, gene prediction and comparison with the available genome of L. theobromae CSS-01s (MDYX00000000.1).

From: A multi-omics analysis of the grapevine pathogen Lasiodiplodia theobromae reveals that temperature affects the expression of virulence- and pathogenicity-related genes

Lasiodiplodia theobromae

LA-SOL3

CSS-01s

(MDYX00000000.1)

Size (Mb)

43.9

43.3

Coverage

214x

90x

% G + C content

54.75

54.77

% Repeats

2.21

3.02

Number of genes

12785

12902

Average gene length (bp)

1610

1629

% of genome covered by genes

46.8

~48.5

% of genome covered by CDS

42.7

43.6

Gene density (genes/Mb)

291

297

Average exons per mRNA

2.8

2.8

Average exon length (bp)

510

506

Average introns per mRNA

1.8

1.8

Average intron length (bp)

86

88

Average mRNAs per gene

1

n.a.