Table 1 Bacterial strains used in this study.

From: Rapid Detection of Genetic Engineering, Structural Variation, and Antimicrobial Resistance Markers in Bacterial Biothreat Pathogens by Nanopore Sequencing

Strain

Susceptibility Profile

Plasmids

Gene

Nucleotide Mutation

Reference

Y. pestis A1122

CIPS, DOXS, GENS

pMT1+, pPCP1+(*), pCD1

gyrA

Wild Type

37

Y. pestis S1037

CIPNS, DOXS, GENS

pMT1+, pPCP1+(*), pCD1

gyrA

C249 A

This work

B. anthracis Sterne/pUTE29

PENS, CIPS, DOXNS

pX01+, pX02, pUTE29+

tetL

NA

19

B. anthracis 411A2

PENS, CIPNS, DOXS

pX01+, pX02

gyrA, parC

C254 T, C242 T

19

B. anthracis UT308

PENR, CIPS, DOXS

pX01+(#), pX02

gyrA

Wild Type

71, 72

  1. Susceptibility, plasmid profiles and genes/mutations associated with antibiotic resistance investigated in this study. (S) susceptible, (NS) non-susceptible, (R) resistant, (+) plasmid present, (−) plasmid absent, (*) multimer forms of this plasmid were detected, (#)UT308 pXO1 is missing the pathogenicity island containing the anthrax toxin genes, (NA) not applicable.