Table 2 Differentially expressed genes by HPV E1 proteins.

From: The Human Papillomavirus (HPV) E1 protein regulates the expression of cellular genes involved in immune response

 

Number of genes p-adj

Genes

HPV16 E1

36

FST, FOSB, DUSP6, MMP1, MACF1, MYH16, NR4A1, CCNA1, EREG, LIF, LAMA3, ANGPTL4, LAMC2, FAM83A, VEGFA, TFPI2, TINAGL1, AHNAK, IER3, FLNB, GABRB3, ABCB1, IFNB1, TP73, TRIM22, IFI44L, CCL5, HERC5, GBP4, IFIT3, SAMD9L, TNFSF10, XAF1, IFIT2, IFNL1, RSAD2

HPV18 E1

15

FOSB, NR4A1, IL11, DUSP6, FOS, CCNA1, CD55, CDKN1A, S100A2, IFNB1, CCL5, C20orf24, IFNL1, RSAD2, HBB

HPV11 E1

14

CYP2C8, NDUFC2, SRP9, COPS2, IFNB1, PARP10, HES1, TNFAIP2, IFIT2, DHX58, USP18, RSAD2, CCL5, IFNL1

  1. Cellular genes with differential expression detected by RNA-Seq from 24 h post-transfected HaCaT cells. Adjusted p-value ≤ 0.05.
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