Table 4 Predicted genes in the intervals of Pl17 and Pl19 from the XRQ assembly.

From: Molecular dissection of resistance gene cluster and candidate gene identification of Pl17 and Pl19 in sunflower by whole-genome resequencing

Candidate gene

Description

Physical position

Length (bp)

For Pl 17

HanXRQChr04g0095641

Probable disease resistance protein (TIR-NBS-LRR class) family, 1099 aa

5672715–5705044

32,330

HanXRQChr04g0095661

Putative protein phosphatase 2 A regulatory subunit PR55; Six-bladed beta-propeller, TolB-like

5766455–5770291

3,843

HanXRQChr04g0095671

Putative TIR domain, 217 aa

5770348–5772558

2,211

HanXRQChr04g0095681

Putative transposase (putative), gypsy type

5772609–5781483

8,875

For Pl 19

HanXRQChr04g0095941

Putative myc-type, basic helix-loop-helix (bHLH) domain, 298 aa

6646897–6648479

1,583

HanXRQChr04g0095951

Probable RNA methyltransferase family protein, 571 aa

6662786–6678357

15,572

HanXRQChr04g0095961

Uncharacterized protein, supported by expression data, 61 aa

6730142–6755053

24,912

Back to article page