Table 8 KEGG pathways (Corrected P Value < 0.05) for the down-regulated DEGs/DEPs by assocation analysis of transcriptome and proteome.

From: Identification of Genes/Proteins Related to Submergence Tolerance by Transcriptome and Proteome Analyses in Soybean

Pathways

DEGs/DEPs

Corrected P-value†

Transcriptome

Proteome

Phenylpropanoid biosynthesis

Glyma.06G275900, Glyma.20G214200,

Glyma.02G259300, Glyma.04G227200

Glyma.01G163100, Glyma.12G195500

Glyma.20G180800, Glyma.14G053600

Glyma.03G039800

3.39E-05

3.69E-13

Tryptophan metabolism

Glyma.06G176200, Glyma.08G350800

2.61E-02

8.30E-07

Metabolic pathways

Glyma.08G074700, Glyma.07G040100 Glyma.08G093300, Glyma.06G275900 Glyma.20G214200, Glyma.02G259300 Glyma.06G176200, Glyma.04G227200 Glyma.09G070000, Glyma.05G216400 Glyma.03G021200, Glyma.13G336600 Glyma.19G028400, Glyma.08G350800 Glyma.12G020000, Glyma.12G038200 Glyma.07G003400, Glyma.01G163100 Glyma.11G171400, Glyma.12G195500 Glyma.17G164100, Glyma.08G200200 Glyma.09G239800, Glyma.20G180800 Glyma.07G233800, Glyma.14G053600 Glyma.03G039800, Glyma.18G265300

3.69E-05

3.59E-04

Isoflavonoid biosynthesis

Glyma.08G246700,Glyma.18G258000

8.05E-06

5.29E-04

Sesquiterpenoid and triterpenoid biosynthesis

Glyma.08G350800, Glyma.12G038200

2.61E-02

1.97E-03

Biosynthesis of secondary metabolites

Glyma.07G040100, Glyma.06G275900

Glyma.20G214200, Glyma.02G259300

Glyma.06G176200, Glyma.04G227200

Glyma.09G070000, Glyma.03G021200

Glyma.19G028400, Glyma.08G350800

Glyma.12G038200, Glyma.01G163100 Glyma.11G171400, Glyma.12G195500

Glyma.17G164100, Glyma.18G285800

Glyma.09G239800, Glyma.20G180800

Glyma.07G233800, Glyma.14G053600

Glyma.03G039800, Glyma.18G265300

2.26E-12

2.29E-03

  1. Corrected P Value, the corrected significant level of statistics, Corrected P value < 0.05 means this GO term was enriched.
  2. DEGs/DEPs, differentially expressed genes/proteins.
  3. Down-regulated DEG: differentially expressed genes (the cutoff value for the log2FoldChange ≤ −2).
  4. Down-regulated DEPs: down-regulated differentially expressed proteins (the cutoff value for the log2FoldChange < −0.26).