Figure 5
Normalized gene expressed levels (TPM) from RNAseq data for 12 different gene copy groups for genes involved in vernalisation (FLC, FRI, SUF4, SVP, VIN3, VRN2, TFL2), affecting FLC expression (SRR1) or affected by vernalisation (TEM1, SOC1, FD, FT) in a diverse set of 30 winter and 30 spring accessions. Whiskers represent standard errors of the mean (SEM). Asterisks show the level of significance based on the Student’s t-test (*p-value < 0.05, **p-value < 0.01, ***p-value < 0.001). Red arrows indicate copies which were strongly (|log2(FC)| >1) up or downregulated comparing winter and spring accessions. Arrows pointing upwards indicate augmented expression in winter accessions, arrows pointing downwards indicate lower expression in winter accessions.
