Table 2 Details of selected candidate reference genes.

From: Selection of suitable reference genes for gene expression studies in myxosporean (Myxozoa, Cnidaria) parasites

Gene Ids

Protein encoded

Generally accepted function

Accepted reference gene for

Used as RG for myxozoans

ACTB

Beta actin

Cytoskeletal structural protein

Commonly accepted reference gene25,32,86

Myxobolus cerebralis32,33

AHC1

Adenosylhomocysteinase

Homocystein synthesis protein

Corals25

 

EF2

Eukaryotic Translation Elongation Factor 2

Nascent protein synthesis protein

Commonly accepted reference gene67,68

 

GAPDH

Glyceraldehyde-3-Phosphate Dehydrogenase

Metabolic protein (glycolytic enzyme)

Commonly accepted reference gene23

 

HPRT 1

Hypoxanthine-Guanine Phosphoribosyltransferase 1

Purine nucleotide synthesis protein

Commonly used for humans22

 

RPB2

DNA-directed RNA polymerase II

RNA polymerase II transcription machinery protein

Humans87

 

18S rRNA

18S ribosomal RNA gene SSU

Ribosome structural protein

Commonly used refrence gene23,88,

Myxobolus cerebralis31

28S rRNA

28S ribosomal RNA gene LSU

Ribosome structural protein

Commonly used reference gene89