Table 8 Genomic assembly statistics of different species of Morchella.
From: The whole-genome sequence analysis of Morchella sextelata
Species | Strain | Assembly (Mb) | GC% | Scaffolds | Contigs | N50 | Genome coverage | INSDC | Sequencing | Assembly method | |
|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Morchella septimelata | MG91 | 49.62 | 47.1 | 3707 | 5121 | 28400 | 58x | QLOX00000000.1 | Illumina | platanus version v. 1.2.1 |
2 | Morchella eximia | MG90 | 73.46 | 46.0 | 7793 | 10613 | 26474 | 57x | QMFK00000000.1 | Illumina | platanus version v. 1.2.1 |
3 | Morchella importuna | M04 M26 | 51.08 | 47.3 | 106 | 110 | 958716 | 298x | QOKS00000000.1 | Illumina HiSeq | AllPaths v. 44849 |
4 | Morchella conica | CCBAS932 | 48.21 | 47.2 | 540 | 2145 | 52248 | 67.8x | PZQV00000000.1 | Illumina | AllPathsLG v. R47710 |
5 | Morchella importuna | M04 M24 | 48.86 | 47.0 | 323 | 504 | 362388 | 210x | QORM00000000.1 | Illumina HiSeq | AllPaths v. 44849 |
6 | Morchella septimelata | MG91 | 49.96 | — | 5231 | 5241 | 37765 | 151.17x | PYSJ00000000.1 | Illumina GAIIx | SPAdes v. 3.0 |
7 | Morchella septimelata | MG113 | 51.40 | — | 9172 | 11637 | 28426 | 88x | QMFJ00000000.1 | Illumina | platanus version v. 1.2.1 |
