Table 2 sRNAS that are significantly differently transcribed in JE2ΔclpX relative to the JE2 wild-type.

From: Staphylococcus aureus ClpX localizes at the division septum and impacts transcription of genes involved in cell division, T7-secretion, and SaPI5-excision

ID*26

sRNA*26

Fold change JE2/JE2ΔclpX

Padj

SAUSA300s013

Lysine riboswitch

6,6

1,42E-08

SAUSA300s084

Teg27

5,8

4,34E-26

SAUSA300s030

sprC

4,4

9,78E-03

SAUSA300s003

T-box riboswitch

3,9

4,07E-16

SAUSA300s002

SAM riboswitch

3,7

1,46E-27

SAUSA300s168

Sau-76

3,5

4,16E-06

SAUSA300s128

ssr63

3,4

3,24E-08

SAUSA300s041

rsaOB

2,7

2,12E-04

SAUSA300s176

Sau-26

2,5

2,67E-13

SAUSA300s281

tsr17

2,2

1,60E-03

SAUSA300s129

ssr68

2,2

2,38E-12

SAUSA300s284

tsr20

2,1

6,62E-04

SAUSA300s034

sprF3

1,9

3,74E-04

SAUSA300s285

tsr21

1,8

3,61E-04

SAUSA300s007

SAM riboswitch

1,8

8,49E-03

SAUSA300s181

Sau-72

1,8

1,07E-03

SAUSA300s166

Teg40as

1,7

9,04E-03

SAUSA300s065

Sau-59

1,6

9,90E-04

SAUSA300s279

tsr15

1,5

5,51E-03

SAUSA300s173

Sau-15

1,5

6,05E-03

SAUSA300s190

Sau-6515

1,3

2,02E-03

SAUSA300s191

Sau-6524

0,7

4,36E-03

SAUSA300s263

JKD6008sRNA403

0,7

2,02E-03

SAUSA300s187

Sau-6405

0,6

3,61E-04

SAUSA300s006

ssrA

0,6

2,56E-04

SAUSA300s238

JKD6008sRNA259

0,6

2,96E-04

SAUSA300s197

Sau-6769

0,6

3,86E-04

SAUSA300s180

Sau-39

0,6

7,41E-05

SAUSA300s165

Teg38as

0,6

9,78E-03

SAUSA300s182

Sau-6079

0,5

1,79E-03

SAUSA300s024

GlmS ribozyme

0,5

6,83E-07

SAUSA300s140

ssr128

0,4

1,09E-03

SAUSA300s080

rsaOV

0,4

3,77E-04

SAUSA300s164

Teg36as

0,3

8,58E-14

SAUSA300s211

JKD6008sRNA073

0,3

4,75E-03

SAUSA300s117

ssr8

0,3

9,09E-06

SAUSA300s152

Teg13

0,2

4,19E-06

SAUSA300s226

JKD6008sRNA173

0,0

1,01E-11

  1. *Inactivation of ClpXP impacts expression of all listed sRNAs except rsaOB. Additionally, sRNAs written in bold are predicted to be controlled by ClpX also via ClpP independent pathways.