Table 2 Genome-wide association analysis of serum urate stratified by center.
SNP | Minor Allele | MAF | P-value | β | SE | Effect Size | Gene | Gene loc | Chr | Chr pos hg18 |
|---|---|---|---|---|---|---|---|---|---|---|
Arizona | ||||||||||
rs13145758 | A | 0.43 | 1.1 × 10−10 | −0.35 | 0.05 | 0.06 | SLC2A9 | Intron | 4 | 9981997 |
rs9998811 | G | 0.44 | 7.4 × 10−10 | −0.33 | 0.05 | 0.06 | SLC2A9 | Intron | 4 | 9966477 |
rs7862063 | G | 0.41 | 4. 5 × 10−8 | 0.29 | 0.05 | 0.04 | — | — | 9 | 110002036 |
rs4481233 | A | 0.41 | 2.3 × 10−6 | −0.26 | 0.05 | 0.03 | SLC2A9 | Intron | 4 | 9956079 |
rs6688009 | A | 0.01 | 9. 1 × 10−6 | 1.07 | 0.24 | 0.03 | PPAP2B | Intron | 1 | 24593576 |
Dakotas | ||||||||||
rs4481233 | A | 0.25 | 6. 7 × 10−8 | −0.29 | 0.05 | 0.04 | SLC2A9 | Intron | 4 | 9956079 |
rs7696092 | C | 0.19 | 1. 6 × 10−6 | −0.29 | 0.06 | 0.03 | SLC2A9 | Intron | 4 | 10025320 |
rs179409 | G | 0.45 | 3.4 × 10−6 | −0.23 | 0.05 | 0.03 | KCNQ1 | Intron | 11 | 2483882 |
rs9998811 | A | 0.41 | 4.2 × 10−6 | −0.22 | 0.05 | 0.03 | SLC2A9 | Intron | 4 | 9966477 |
rs13145758 | G | 0.40 | 5.1 × 10−6 | −0.22 | 0.05 | 0.03 | SLC2A9 | Intron | 4 | 9981997 |
rs7947391 | A | 0.22 | 5.6 × 10−6 | −0.26 | 0.06 | 0.02 | NPAS4 | Intron | 11 | 66186882 |
Oklahoma | ||||||||||
rs4481233 | A | 0.30 | 3.3 × 10−9 | −0.30 | 0.05 | 0.06 | SLC2A9 | Intron | 4 | 9956079 |
rs9998811 | A | 0.46 | 5.8 × 10−7 | −0.23 | 0.05 | 0.04 | SLC2A9 | Intron | 4 | 9966477 |
rs4148155 | G | 0.20 | 1.1 × 10−7 | 0.29 | 0.06 | 0.03 | ABCG2 | Intron | 4 | 89054667 |
rs2231142 | A | 0.20 | 1.1 × 10−6 | 0.29 | 0.06 | 0.03 | ABCG2 | Missense | 4 | 89052323 |
rs1481012 | G | 0.20 | 1.1 × 10−6 | 0.29 | 0.06 | 0.03 | ABCG2 | Intron | 4 | 89039082 |
rs7696092 | C | 0.29 | 2.1 × 10−6 | −0.25 | 0.05 | 0.04 | SLC2A9 | Intron | 4 | 10025320 |
rs13145758 | G | 0.45 | 2.7 × 10−6 | −0.22 | 0.05 | 0.03 | SLC2A9 | Intron | 4 | 9981997 |
rs746075 | A | 0.36 | 2.8 × 10−6 | 0.22 | 0.05 | 0.04 | NUCB1 | Intron | 19 | 49416936 |