Table 2 Genome-wide association analysis of serum urate stratified by center.

From: Fine mapping and identification of serum urate loci in American Indians: The Strong Heart Family Study

SNP

Minor Allele

MAF

P-value

β

SE

Effect Size

Gene

Gene loc

Chr

Chr pos hg18

Arizona

rs13145758

A

0.43

1.1 × 10−10

−0.35

0.05

0.06

SLC2A9

Intron

4

9981997

rs9998811

G

0.44

7.4 × 10−10

−0.33

0.05

0.06

SLC2A9

Intron

4

9966477

rs7862063

G

0.41

4. 5 × 10−8

0.29

0.05

0.04

9

110002036

rs4481233

A

0.41

2.3 × 10−6

−0.26

0.05

0.03

SLC2A9

Intron

4

9956079

rs6688009

A

0.01

9. 1 × 10−6

1.07

0.24

0.03

PPAP2B

Intron

1

24593576

Dakotas

rs4481233

A

0.25

6. 7 × 10−8

−0.29

0.05

0.04

SLC2A9

Intron

4

9956079

rs7696092

C

0.19

1. 6 × 10−6

−0.29

0.06

0.03

SLC2A9

Intron

4

10025320

rs179409

G

0.45

3.4 × 10−6

−0.23

0.05

0.03

KCNQ1

Intron

11

2483882

rs9998811

A

0.41

4.2 × 10−6

−0.22

0.05

0.03

SLC2A9

Intron

4

9966477

rs13145758

G

0.40

5.1 × 10−6

−0.22

0.05

0.03

SLC2A9

Intron

4

9981997

rs7947391

A

0.22

5.6 × 10−6

−0.26

0.06

0.02

NPAS4

Intron

11

66186882

Oklahoma

rs4481233

A

0.30

3.3 × 10−9

−0.30

0.05

0.06

SLC2A9

Intron

4

9956079

rs9998811

A

0.46

5.8 × 10−7

−0.23

0.05

0.04

SLC2A9

Intron

4

9966477

rs4148155

G

0.20

1.1 × 10−7

0.29

0.06

0.03

ABCG2

Intron

4

89054667

rs2231142

A

0.20

1.1 × 10−6

0.29

0.06

0.03

ABCG2

Missense

4

89052323

rs1481012

G

0.20

1.1 × 10−6

0.29

0.06

0.03

ABCG2

Intron

4

89039082

rs7696092

C

0.29

2.1 × 10−6

−0.25

0.05

0.04

SLC2A9

Intron

4

10025320

rs13145758

G

0.45

2.7 × 10−6

−0.22

0.05

0.03

SLC2A9

Intron

4

9981997

rs746075

A

0.36

2.8 × 10−6

0.22

0.05

0.04

NUCB1

Intron

19

49416936

  1. *SNP: single nucleotide polymorphism; MAF: minor allele frequency; P-value: P-values from measured genotype analysis; β: beta coefficient of the SNP; SE: standard error; Effect Size: Proportion of the residual phenotypic variance that is explained by the minor allele of the SNP; Gene loc: Gene location; Chr pos: chromosome position in base pairs; SLC2A9: solute carrier family 2, member 9; PPAP2B: phosphatidic acid phosphatase type 2; KCNQ1: voltage gated KQT-like subfamily Q, member 1; ATP13A5: ATPase type 13A5; ABCG2: ATP-binding cassette family G, member 2; NUCB: Nucleobindin.