Table 1 Phosphopeptides only identified in W peptide-stimulated CaLu-6 cells.

From: Phosphoproteomic analysis sheds light on intracellular signaling cascades triggered by Formyl-Peptide Receptor 2

Accessions

Description

Peptide Sequence

Positions

ptmRS Probabilities

O60256-1

PRPP synthase-associated protein 2

[R].LGIAVIHGEAQDAESDLVDGRHSPPMVR.[S]

[205–232]

S23: 100

O95425–3

Isoform SV3 of Supervillin

[R].SPSFGDPQLSPEARPR.[CV]

[261–276]

S10: 100

O95747

Serine/threonine-protein kinase OSR1

[R].LHKTEDGGWEWSDDEFDEESEEGK.[A]

[328–351]

S12: 100

P04792

Heat shock protein beta-1

[R].QLSSGVSEIR.[H]

[80–89]

S3: 100

P06400

Retinoblastoma-associated protein

[K].DREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK.[K]

[578–614]

S31: 98.09; S35: 100

P06748

Nucleophosmin

[K].MQASIEKGGSLPKVEAK.[F]

[251–267]

S4: 100

P07910-1

Heterogeneous nuclear ribonucleoproteins C1

[K].MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIK.[D]

[238–271]

S10: 100

P16401

Histone H1.5

[K].KATKSPAKPK.[A]

[185–194]

S5: 100

P23588

eukaryotic translation initiation factor 4B

[R].ERHPSWRSEETQER.[E]

[402–415]

S5: 99.37

P29590

Protein PML

[R].SPVIGSEVFLPNSNHVASGAGEAEER.[V]

[530–555]

S1: 100

P29966

Myristoylated alanine-rich C-kinase substrate

[K].SFKLSGFSFKK.[N]

[163–173]

S8: 100

P31943

Heterogeneous nuclear ribonucleoprotein H 1

[K].HTGPNSPDTANDGFVR.[L]

[99–114]

S6: 100

P38159-1

RNA-binding motif protein,X chromosome

[R].DVYLSPRDDGYSTKDSYSSR.[D]

[204–223]

S5: 100

P42167

Lamina-associated polypeptide 2

[R].AKTPVTLK.[Q]

[206–213]

T3: 100

P49006

MARCKS-related protein

[K].KFSFKKPFK.[L]

[91–99]

S3: 100

P49585

choline-phosphate cytidylyltransferase A

[R].HKAAAYDISEDEED.[−]

[354-367]

S9: 100

P51991-1

Heterogeneous nuclear ribonucleoprotein A3

[R].SSGSPYGGGYGSGGGSGGYGSRRF.[−]

[355–378]

S4: 100

Q01518-1

adenylyl cyclase-associated protein 1

[R].SGPKPFSAPKPQTSPSPKR.[A]

[295–313]

T13: 99.99; S14: 50; S16: 50

Q01581

hydroxymethylglutaryl-CoA synthase, cytoplasmic

[R].RPTPNDDTLDEGVGLVHSNIATEHIPSPAK.[K]

[469–498]

S27: 100

Q04637-8

Isoform 8 of eIF-4-gamma 1

[R].EAALPPVSPLKAALSEEELEKK.[S]

[1225–1246]

S8: 100

Q13442

28 kDa heat- and acid-stable phosphoprotein

[K].SLDSDESEDEEDDYQQKRK.[G]

[57–75]

S4: 100; S7: 100

Q15424-3

Isoform 3 of Scaffold attachment factor B1

[R].SVVSFDKVKEPR.[K]

[601–612]

S4: 100

Q8IU81

Interferon regulatory factor 2-binding protein 1

[R].AGGASPAASSTAQPPTQHR.[L]

[449–467]

S5: 100

Q8NC51-1

PAI1 RNA-binding protein 1

[R].GGSGSHNWGTVKDELTESPKYIQK.[Q]

[217–240]

S18: 96.8

Q8WUD4

Coiled-coil domain-containing protein 12

[R].LKGQEDSLASAVDAATEQKTCDSD.[−]

[143–166]

S23: 100

Q8WW12

PEST proteolytic signal-containing nuclear protein

[K].TLSVAAAFNEDEDSEPEEMPPEAKMR.[M]

[106–131]

S14: 100

Q8WY36

HMG box transcription factor BBX

[R].TADGRVSPAGGTLDDKPKEQLQR.[S]

[838–860]

S7: 99.99

Q92538

BFA-resistant GEF 1

[R].GYTSDSEVYTDHGRPGK.[I]

[1315–1331]

S4: 99.46

Q96A00

Protein phosphatase 1 regulatory subunit 14 A

[R].VLSKLQSPSR.[A]

[10–19]

S7: 99.72

Q9HC35

Echinoderm microtubule-associated protein-like 4

[R].ASPSPQPSSQPLQIHR.[Q]

[143–158]

S4: 99.36

Q9UDY2-7

Isoform 7 of Tight junction protein ZO-2

[R].SSEPVQHEESIRKPSPEPR.[A]

[983–1001]

S15: 99.98

Q96FF9

Sororin

[R].SGPRAPSPTKPLRR.[S]

[15–28]

S7: 99.99

Q8NE71-1

ATP-binding cassette sub-family F member 1

[K].KAEQGSEEEGEGEEEEEEGGESKADDPYAHLSK.[K]

[223–255]

S6: 100

  

[R].LKKLSVPTSDEEDEVPAPKPR.[G]

[101–121]

S5: 100; T8: 100; S9: 100

Q9GZR7

ATP-dependent RNA helicase DDX24

[K].AQAVSEEEEEEEGKSSSPK.[K]

[78–96]

S5: 100

  

[K].AQAVSEEEEEEEGK.[S]

[78–91]

S5: 100

  

[R].KAQAVSEEEEEEEGK.[S]

[77–91]

S6: 100

  

[K].VVDYSQFQESDDADEDYGRDSGPPTKK.[I]

[10–36]

S10: 100

Q9H6F5

Coiled-coil domain-containing protein 86

[R].APGSPRGQHEPSKPPPAGETVTGGFGAK.[K]

[185–212]

S4: 100

  

[R].AGLGSPERPPKTSPGSPR.[L]

[54–71]

S16: 99.99

  

[R].RALVEFESNPEETREPGSPPSVQR.[A]

[30–53]

S18: 99.18

Q8WWM7-3

Isoform 3 of Ataxin-2-like protein

[K].EVDGLLTSEPMGSPVSSK.[T]

[582–599]

S13: 100

  

[K].STSTPTSPGPR.[T]

[678–688]

S7: 100

P52926-1

high mobility group protein HMGI-C

[R].KWPQQVVQKKPAQEETEETSSQESAEED.[−]

[82–109]

S24: 100

  

[R].KWPQQVVQKKPAQEETEETSSQESAEED.[−]

[82–109]

T19: 66.67; S20: 66.67; S21: 66.67; S24: 100

  

[R].KWPQQVVQKKPAQEETEETSSQESAEED.[−]

[82–109]

S20: 97.22; S21: 97.22

P19338

Nucleolin

[K].AAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKK.[A]

[177–220]

S8: 100; S30: 100

  

[K].VVVSPTKKVAVATPAK.[K]

[64–79]

S4: 99.99

P49736

DNA replication licensing factor mcm2

[R].GLLYDSDEEDEERPARK.[R]

[134–150]

S6: 100

  

[R].RGLLYDSDEEDEERPARK.[R]

[133–150]

S7: 100

Q9H1E3

Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1

[K].VVDYSQFQESDDADEDYGRDSGPPTK.[K]

[10–35]

S10: 100

  

[R].KVVDYSQFQESDDADEDYGRDSGPPTK.[K]

[9–35]

S11: 100

  

[R].LKATVTPSPVKGK.[G]

[174–186]

T6: 100; S8: 100

  1. Peptide sequence and positions within proteins togheter with accession numbers and descriptions are reported. Localization and best site probability for phosphorylation within peptides performed with the ptmRS tool of the Proteome Discoverer are also reported.