Table 1 Targeted loci and primer combinations used in this study.
Marker | Gene | Forward | Sequence 5′-3′ | Reverse | Sequence 5′-3′ |
|---|---|---|---|---|---|
COIA | COI | ArF115 | GCNCCWGAYATRGCNTTYCCNCG | Fol-degen-rev7 | TANACYTCNGGRTGNCCRAARAAYCA |
COIB | COI | mlCOIintF14 | GGWACWGGWTGAACWGTWTAYCCYCC | Fol-degen-rev7 | TANACYTCNGGRTGNCCRAARAAYCA |
18SV1-2 | 18SrDNA_V1-2 | SSU_FO441 | GCTTGTCTCAAAGATTAAGCC | SSU_R2241 | GCCTGCTGCCTTCCTTGGA |
18SV6-7 | 18SrDNA_V6-7 | 18s_2F42 | AACTTAAAGRAATTGACGGA | 18s_4R42 | CKRAGGGCATYACWGACCTGTTAT |
28SD6 | 28SrDNA_D6 | 28s_3F42 | TTTTGGTAAGCAGAACTGGYG | 28s_4R42 | ABTYGCTACTRCCACYRAGATC |
H3 | Histone H3 | H3aF43 | ATGGCTCGTACCAAGCAGACVGC | H3Ar43 | ATATCCTTRGGCATRATRGTGAC |