Table 1 The original RBS and alternative SLiM versions identified in this study and named RBS-V1 – RBS-V3.

From: Evolutionary conservation of the intrinsic disorder-based Radical-Induced Cell Death1 hub interactome

TF group

NAC013/016/017

DREB2A DREB2B DREB2C

STO

NAC046

BBX8

bZIP23

RBS

[ED].{1,2}[^RK][YF].{1,4}[^RK][DE]L

23/29

15/28

22/30

5/27

26/33

8/27

RBS-V1

.{1,2}[^RK][YF].{1,4}[^RK][DE]L

1

1

0

12

0

3

RBS-V2

[ED].{1,2}[^RK][YF].{1,4}[^RK][DE][FIMV]

5

6

3

1

4

12

RBS-V3

[ED].{1,2}[^RK][YF].{1,4}[^RK][DE].L

0

3

0

1

0

13

  1. The six plant TF groups containing members, which have been experimental verified to bind to RCD1-RST domains30,42, are shown at the top. To the left of the stroke: Number of homologs containing the RCD1-binding SLiM. To the right of the stroke: Number of identified homologs. The number of occurrences of the three alternative SLiM versions in TFs without the consensus RBS are also shown.
Back to article page