Table 3 Main (relative abundance ≥1%) core bacterial and fungal genera.

From: Defining the root endosphere and rhizosphere microbiomes from the World Olive Germplasm Collection

Bacterial core

Genus

Root endosphere (%)a

Rhizosphere (%)b

Actinophytocola

22.07

0.07

Streptomyces

13.17

0.31

Gp6

0.58

11.08

Gp4

0.26

9.31

Pseudonocardia

9.37

0.14

Rhizobium

2.00

7.71

Sphingomonas

0.77

5.92

Gemmatimonas

0.06

5.24

candidate_division_WPS-1d

0.08

3.92

Gp7

0.04

4.08

Bacillus

0.68

2.31

Bradyrhizobium

2.57

0.20

Ensifer

2.56

0.15

Rubrobacter

0.05

2.48

Subdivision3d

0.02

2.35

Steroidobacter

1.78

0.34

Candidatus_Saccharibacteriad

1.03

0.40

Saccharothrix

1.18

0.07

Ohtaekwangia

0.21

1.03

Mycobacterium

0.98

0.09

Nonomuraea

1.04

0.04

Fungal core

Genus

Root endosphere (%)c

Rhizosphere (%)b

Canalisporium

29.53

6.05

Macrophomina

10.93

2.44

Aspergillus

1.66

3.84

Malassezia

0.28

1.37

  1. aRelative abundance average of 22 cultivars.
  2. bRelative abundance average of 36 cultivars.
  3. cRelative abundance average of 33 cultivars.
  4. dName of phylum/class to which this incertae sedis genus belongs.