Table 1 Performance of FamANC in simulated families.
N | Software used in Step 1 | Dosage error | Number of loci with errors | |||
|---|---|---|---|---|---|---|
Step 1 | Step 2 | Step 1 | Step 2 | |||
Family 1 | 20 | SABER+ | 4456.3 | 3643 | 7217 | 3643 |
HAPMIX | 5543.5 | 3160 | 4723 | 3160 | ||
Family 2 | 10 | SABER+ | 2305.4 | 1671 | 4623 | 1671 |
HAPMIX | 3993.7 | 2019 | 3451 | 2019 | ||
Family 3 | 4 | SABER+ | 43.6 | 24 | 136 | 24 |
HAPMIX | 57.6 | 14 | 64 | 14 | ||
Total | 34 | SABER+ | 6805.3 | 5338 | 11976 | 5338 |
HAPMIX | 9594.8 | 5193 | 8238 | 5193 | ||
