Table 2 Cancer-specific somatic mutations identified by comparing colorectal variants with paired normal colon tissue variants.
Patient ID | n. of SNV/INDEL | n. of somatic variants | % of somatic variants | n. of somatic variants in coding region | Novel Variants | Known Variants | n. of genes |
|---|---|---|---|---|---|---|---|
3 | 28614 | 1272 | 4,4 | 387 | 38 | 349 | 291 |
11 | 35635 | 2076 | 5,8 | 737 | 134 | 603 | 543 |
17 | 30561 | 3156 | 10,3 | 1247 | 173 | 1074 | 923 |
25 | 20721 | 761 | 3,7 | 188 | 28 | 160 | 113 |
35 | 26345 | 942 | 3,6 | 281 | 33 | 248 | 208 |
39 | 20255 | 778 | 3,8 | 208 | 23 | 185 | 153 |
43 | 38031 | 1631 | 4,3 | 531 | 57 | 474 | 391 |
49 | 27298 | 1192 | 4,4 | 423 | 35 | 388 | 286 |
51 | 42897 | 3399 | 7,9 | 1284 | 291 | 993 | 927 |
53 | 34784 | 1698 | 4,9 | 564 | 50 | 514 | 405 |
55 | 16282 | 646 | 4,0 | 210 | 27 | 183 | 154 |
59 | 26558 | 2254 | 8,5 | 873 | 165 | 708 | 644 |
61 | 21946 | 442 | 2,0 | 104 | 8 | 96 | 69 |
69 | 35369 | 1598 | 4,5 | 659 | 62 | 597 | 503 |
81 | 36339 | 4088 | 11,2 | 1615 | 241 | 1374 | 798 |
97 | 35441 | 2858 | 8,1 | 1151 | 271 | 880 | 861 |
