Table 3 Number of alternative splicing events occurring in colorectal carcinoma in comparison to normal tissues.

From: Landscape of transcriptome variations uncovering known and novel driver events in colorectal carcinoma

Event Type

NumEvents.JC + readsOnTarget

SigEvents.JC + readsOnTarget

SE

74824

4361 (1456:2905)

MXE

22385

6828 (5923:905)

A5SS

2792

581 (323:258)

A3SS

3409

755 (307:448)

RI

824

275 (155:120)

  1. Type of alternative splicing event: SE: Skipped exon; MXE: Mutually exclusive exon; A5SS: Alternative 5′ splice site; A3SS: Alternative 3′ splice site; RI: Retained intron; NumEvents.JC + readsOnTarget: total number of events detected using both Junction Counts and reads on target; SigEvents.JC + readsOnTarget: number of significant events detected using both Junction Counts and reads on target; the numbers in the parentheses (n1:n2) indicate the number of significant events that have higher inclusion level for colorectal carcinoma (n1) or for normal tissue (n2).
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