Table 1 Sequence types (ST), antibiotic resistance genes and integrons found in the Klebsiella pneumoniae isolates.

From: Pathogenomics and Evolutionary Epidemiology of Multi-Drug Resistant Clinical Klebsiella pneumoniae Isolated from Pretoria, South Africa

Sample code (MLST)

Integron

Cassette arrays

GC1

GC2

GC3

GC4

GC5

GC6

K021 (ST152)

ln1481*

aadA16

K058 (ST1414)

ln191, ln792, ln54

dfrA17 dfrA14b aadA16 aacA4

aadA5 arr3

K089 (ST1552)

ln369

dfrA1d

K179 (ST39)

ln388

dfrA15

aadA1a

E041 (ST15)

ln388

dfrA15

dfrA15

K025 (ST152)

ln369

dfrA1b

aadA1a

K031 (ST152)

ln18

dfrA1b

aadA1a

K051 (ST152)

ln369

dfrA17

aadA5

K059 (ST234)

ln191, ln27

dfrA14b dfrA12

gcuF

aadA2

K061 (ST1552)

ln369

dfrA1b

aadA1b

K078 (ST1414)

ln191, ln792, ln54

dfrA1b aacA4 dfrA17

Arr3 aadA5

K086 (ST1552)

ln369

dfrA1b

aadA1b

K094

ln191

dfrA1b

K090 (ST323)

ln191

dfrA1b

K087 (ST15)

ln191

dfrA1b

K110 (ST152)

ln369

dfrA1b

aadA1b

K117 (ST1552)

None

dfrA1b

aadA1

K141 (ST1414)

ln191, ln54

dfrA17

aadA5

K077 (ST1552)

dfrA1b

aadA1

K071 (ST152)

ln369

dfrA1b dfrA14b

aadA1b

K080 (ST234)

ln369

dfrA1b

aadA1b

K181 (ST152)

ln0

 

K125 (ST15)

ln191

dfrA1b

K145 (ST39)

ln191, ln1482*

dfrA1b dfrA30b

K161 (ST25)

ln1229

aacA4cr

arr3

dfrA27

K085 (ST101)

ln191

dfrA14b

K104 (ST15)

ln388

dfrA15

aadA1a

K129 (ST643)

ln388

dfrA15

aadA1a

K131 (ST152)

None

aacA4cr

K118 (ST14)

ln191, ln22

dfrA7 dfrA14b

K014 (ST607)

None

aacA4cr

K038 (ST1552)

ln369

dfrA14b dfrA1b

aadA1b

K053 (ST234)

ln191

dfrA14b

K054 (ST234)

In27

dfrA12 dfrA14b

gcuF

aadA2

K062 (ST234)

In27

dfrA12

gcuF

aadA2

K069 (ST152)

In369

dfrA1b aacA4cr

aadA1b

K120 (ST17)

None

dfrA14b

K123

In191

dfrA14b

K126 (ST101)

In369

dfrA14b

aadA1b

K137 (ST182)

In388

dfrA15

aadA1a

K146 (1414)

In191

dfrA14b

ln792

aacA4

arr3

 

In54

dfrA17

aadA5

 

K169 (ST101)

In369

dfrA1b

aadA1b

  1. *New integrons are identified by an asterix.