Figure 3 | Scientific Reports

Figure 3

From: Surveillance-embedded genomic outbreak resolution of methicillin-susceptible Staphylococcus aureus in a neonatal intensive care unit

Figure 3

Concordance between traditional typing methods and WGS based phylogeny. The circular phylogenetic tree is based on 8,575 core hqSNPs among the sequenced isolates. Each branch represents an MSSA isolate. The colored lanes indicate spa type (inner lane) and MLVA type (outer lane). RUMC labels represent identifiers of deposited sequencing data. The labels (A–D) anticipate representation of the isolate in the MST panels of Fig. 4. Abbreviations: MT: MLVA type; MC: MLVA clone; NA: not assigned; HCW: healthcare worker; MST: minimum spanning tree.

Back to article page