Figure 4 | Scientific Reports

Figure 4

From: Surveillance-embedded genomic outbreak resolution of methicillin-susceptible Staphylococcus aureus in a neonatal intensive care unit

Figure 4

Minimum spanning trees of core hqSNP subset analyses. Nodes represent MSSA isolates which are labeled by month of isolation and colored according to traditional MLVA type assigned. Nodes of a subset are connected to their closest neighbors based on relative distances expressed in SNP difference ratios. Edges are not scaled. The arrow in panel D indicates the core SNP differences whose genomic locations are further specified. Abbreviations: hqSNP: high quality single nucleotide polymorphism; MT: MLVA type; MC: MLVA clone; NA: not assigned; HCW: healthcare worker.

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