Table 1 Summary of the five datasets.

From: Neighborhood Preference of Amino Acids in Protein Structures and its Applications in Protein Structure Assessment

Dataset Name

Protein size

No. of protein decoy sets

Number of structures in each decoy set

References

I-TASSER (a)

47–118 aa

56

400

36

I-TASSER (b)

47–118 aa

56

400

36,50

3DRobot

80–250 aa

200 (48 α-, 40 β-, and 112 α/β-single-domain proteins)

300

50

Rosetta

50–146 aa

58

100

50,55

Modeller

81–340 aa

20

200

50,56

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