Figure 5 | Scientific Reports

Figure 5

From: Root transcriptome reveals efficient cell signaling and energy conservation key to aluminum toxicity tolerance in acidic soil adapted rice genotype

Figure 5

Heat map representation and K-means clustering of expression profiles of genes differentially expressed under Al stress conditions in AR (A), IR (B) and TH (C). The ion torrent RNA-seq data were re-analyzed, and the FPKM values were log2 transformed and heat map generated using MeV v4.11 software. Clustering was performed on log2 fold change for each gene under Al stress conditions when compared with control condition across the three genotypes. Genes exhibiting a similar pattern of expression under Al stress conditions cluster together. Red and green colours denote control (no Al3+) and treatment (0.54 mM Al3+), respectively. Bar at the bottom represents log2 fold values.

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