Table 1 Effect of pyrazineguanidine and benzoylguanidine compounds on viability of MCF-7 and MDA-MB-231 spheroids.

From: Pyrazine ring-based Na+/H+ exchanger (NHE) inhibitors potently inhibit cancer cell growth in 3D culture, independent of NHE1

 

Structurea

Lipophilicityb

Reported Ki values for NHE1 (µM)c

Reported IC50 values for NHE1 (µM)d

Experimentally determined EC50 values for compound-induced loss of viability (µM)e

MCF-7

95% CI

MDA-MB-231

95% CI

Amiloride

0.68 (LogD) 0.93 (LogP)

1.0–7.0

3.7–60

30.5

18.23–42.28

55.8

32.51–81.68

DMA

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1.64 (LogD)

0.023–0.5

0.19

16.6

8.47–32.41

59

30.43–114.20

EIPA

3.2 (LogD)

0.01–0.1

0.016–0.8

4.8

1.29–17.78

19.6*

-

HMA

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2.94 (LogD)

0.013

2.5

0.86–7.33

13.5

4.73–38.34

Cariporide

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−1.01 (LogP)

0.008–0.04

0.03–3.4

ND**

ND

ND**

ND

Eniporide

−1.03 (LogP)

0.0045–0.38

ND***

ND

ND***

ND

  1. The table displays reported IC50 and Ki values for NHE1 for the tested inhibitors, alongside experimentally obtained EC50 values for compound-induced loss of viability. aChemical structure of inhibitors. Blue: pyrazine ring characteristic for pyrazineguanidine compounds. Green: phenyl ring characteristic for benzoylguanidine compounds. Red highlights the different substitutions on the 5-position. bThe reported lipophilicity of each compound indicated by LogD and/or LogP values. cReported NHE1 Ki values presented in µM. dReported NHE1 IC50 values, determined in the presence of 100–130 mM Na+, presented in µM. eExperimentally obtained EC50 values based on 3 n for each inhibitor. EC50 values were calculated in GraphPad Prism by nonlinear regression using the equation Y = Bottom + (Top-Bottom)/(1 + 10^((X-logIC50))), where X is the logarithm of the inhibitor concentration, top and bottom are the highest and lowest cell viability responses measured, respectively, and Y is the relative cell viability. The corresponding 95% confidence intervals for each EC50 value is presented alongside. ND: not determined. *EC50 calculated from trendline equation generated in Excel. **No effects of concentrations up to 10 µM. ***No effect of concentrations up to 20 µM. Table refs. 13,15,17,42,48,49,50,51,56,57,58,59,60,61.