Table 2 Total number of sequence reads generated and aligned sequence pairs from H. irregulare and H. occidentale liquid cultures and 2, 4, and 6 weeks infected Norway spruce bark.

From: The conifer root rot pathogens Heterobasidion irregulare and Heterobasidion occidentale employ different strategies to infect Norway spruce

Samples names*

Total reads

Aligned pairs

Mapped pairs (%)

TC32-1-L-rep1

11809378

9114879

77.2

TC32-1-L-rep2

10555531

8764947

83.0

TC32-1-L-rep3

13240830

11124807

84.0

TC32-1-2w-rep1

39748040

1148233

2.9

TC32-1-2w-rep2

43180655

1637664

3.8

TC32-1-2w-rep3

40750502

1282462

3.1

TC32-1-4w-rep1

121996688

583954

0.5

TC32-1-4w-rep2

49434129

1241663

2.5

TC32-1-4w-rep3

95247997

3219921

3.4

TC32-1-6w-rep1

58357874

229570

0.4

TC32-1-6w-rep2

53266103

681649

1.3

TC32-1-6w-rep3

55675183

975852

1.8

TC122-12-L-rep1

13661132

11135225

81.5

TC122-12-L-rep2

12389419

10207752

82.4

TC122-12-L-rep3

11098200

9092986

81.9

TC122-12-2w-rep1

30863928

6764247

21.9

TC122-12-2w-rep2

39222132

1928245

4.9

TC122-12-2w-rep3

33431531

2346657

7.0

TC122-12-4w-rep1

154786107

1519679

1.0

TC122-12-4w-rep2

78321161

1714337

2.2

TC122-12-4w-rep3

32287019

4234747

13.1

TC122-12-6w-rep1

30472557

5817262

19.1

TC122-12-6w-rep2

73805957

3078694

4.2

TC122-12-6w-rep3

142671388

3277956

2.3

  1. H. irregulare = TC32-1 and H. occidentale = TC122-12; L = liquid culture, 2 w, 4 w and 6 w = 2, 4, and 6 weeks after inoculating Norway spruce bark with the fungus; rep1, rep2 and rep3 = replicate 1, 2, and 3. 
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