Table 2 Translational modification sites observed at OsPLDα1 locus across the wild Oryza species accessions and Oryza cultivars as compared to the Nipponbare reference sequence.
S.No. | Position# | Alleles* | Codon change | S.No. | Position# | Alleles* | Codon change |
|---|---|---|---|---|---|---|---|
1 | 373 | T/C† | — | 54 | 1964 | T/C† | — |
2 | 1027 | G/A† | — | 55 | 1967 | C/T† | — |
3 | 1043 | G/A† | — | 56 | 1997 | G/A† | — |
4 | 1060 | T/C† | — | 57 | 2048 | T/C† | — |
5 | 1084 | T/C† | — | 58 | 2077 | C/A†† | Thr395Asn |
6 | 1087 | A/T†† | — | 59 | 2081 | A/G† | — |
7 | 1087 | A/C†† | — | 60 | 2084 | A/G† | — |
8 | 1090 | G/C†† | — | 61 | 2087 | C/A†† | — |
9 | 1118 | A/G† | Ile76Val | 62 | 2087 | C/T† | — |
10 | 1120 | C/T† | — | 63 | 2089 | A/C†† | Lys399Thr |
11 | 1121 | A/G† | Asn77Asp | 64 | 2099 | A/T†† | — |
12 | 1123 | C/T† | — | 65 | 2102 | T/A†† | — |
13 | 1135 | T/C† | — | 66 | 2108 | G/A† | — |
14 | 1141 | G/A† | — | 67 | 2174 | G/A† | — |
15 | 1153 | T/C† | — | 68 | 2210 | T/A†† | — |
16 | 1156 | C/T† | — | 69 | 2232 | G/A† | — |
17 | 1162 | T/C† | — | 70 | 2258 | T/C† | — |
18 | 1168 | T/A†† | — | 71 | 2297 | A/C†† | — |
19 | 1207 | T/C† | — | 72 | 2335 | C/T† | Pro481Leu |
20 | 1210 | G/A† | — | 73 | 2363 | T/C† | — |
21 | 1243 | C/T† | — | 74 | 2414 | A/T†† | — |
22 | 1258 | T/C† | — | 75 | 2456 | A/T†† | — |
23 | 1273 | C/T† | — | 76 | 2498 | C/T† | — |
24 | 1275 | G/C†† | Arg128Thr | 77 | 2558 | G/T†† | — |
25 | 1282 | C/T† | — | 78 | 2582 | C/T† | — |
26 | 1303 | C/T† | — | 79 | 2627 | G/A† | — |
27 | 1308 | C/T† | Pro139Leu | 80 | 2636 | A/C†† | — |
28 | 1348 | C/T† | — | 81 | 2657 | A/T†† | — |
29 | 1369 | T/A†† | Asn159Lys | 82 | 2675 | G/A† | — |
30 | 1386 | G/A† | — | 83 | 2715 | C/T† | — |
31 | 1387 | C/T† | Arg165His | 84 | 2727 | G/A† | — |
32 | 1450 | C/G†† | — | 85 | 2738 | G/A† | — |
33 | 1516 | C/T† | — | 86 | 2794 | C/G†† | Ala634Gly |
34 | 1570 | A/G† | — | 87 | 2795 | T/C† | — |
35 | 1607 | G/A† | Glu239Lys | 88 | 2855 | A/G† | — |
36 | 1619 | G/A† | Val729Ile | 89 | 3407 | A/G† | — |
37 | 1639 | A/G† | — | 90 | 3425 | G/A† | — |
38 | 1723 | T/C† | — | 91 | 3446 | T/C† | — |
39 | 1747 | A/G† | — | 92 | 3452 | C/T† | — |
40 | 1753 | G/A† | — | 93 | 3461 | C/T† | — |
41 | 1760 | T/C† | — | 94 | 3481 | C/T† | — |
42 | 1762 | G/A† | — | 95 | 3485 | G/A† | — |
43 | 1788 | A/C†† | Glu299Ala | 96 | 3488 | C/T† | — |
44 | 1789 | A/T†† | — | 97 | 3494 | A/G† | — |
45 | 1808 | G/A† | Asp306Asn | 98 | 3497 | A/G† | — |
46 | 1810 | C/T† | — | 99 | 3503 | T/G†† | — |
47 | 1825 | A/G† | — | 100 | 3549 | G/A† | — |
48 | 1850 | G/A† | Gly320Ser | 101 | 3551 | A/C†† | — |
49 | 1858 | T/C† | — | 102 | 3553 | T/C† | Met728Thr |
50 | 1870 | G/A† | — | 103 | 3554 | G/A† | — |
51 | 1873 | G/A† | — | 104 | 3560 | T/C† | — |
52 | 1879 | A/G† | — | 105 | 3563 | T/C† | — |
53 | 1962 | A/G† | — |
