Table 1 Summary of sequences analysis.

Sample	Raw reads	Clean reads	Mapped reads	Percentage of total reads	Clean bases (Gb)	Q20 (%)	Q30 (%)	GC (%)
SPE1–1	48349304	37105430	26438255	54.68	7.25	99.95	99.6	40.5
SPE1–2	41845696	30077548	21464648	51.29	6.28	99.95	99.55	40.5
SPE1–3	40884398	31540444	22643882	55.39	6.13	99.95	99.65	40.5
SPE2–1	35598878	28872174	20453258	57.45	5.34	99.95	99.7	39.5
SPE2–2	35768122	29357398	20893501	58.41	5.37	99.95	99.7	39.5
SPE2–3	34363944	28938056	20503537	59.67	5.15	99.95	99.7	39.5
SPE3–1	47172926	38797772	27184234	57.63	7.08	99.9	99.55	40.5
SPE3–2	46434824	37086102	26465041	56.99	6.97	99.95	99.8	40.5
SPE3–3	42874686	34390720	24481896	57.10	6.43	99.95	99.7	40
SPE4–1	41120690	34729034	24769384	60.24	6.17	99.95	99.7	42
SPE4–2	38580564	32795348	23255301	60.28	5.79	99.95	99.75	42
SPE4–3	37590610	31220578	22272348	59.25	5.64	99.95	99.7	42
Summary	490584642	394910604			73.6

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