Table 6 KEGG pathway enrichment of DEGs.

From: Transcriptome profiling reveals insertional mutagenesis suppressed the expression of candidate pathogenicity genes in honeybee fungal pathogen, Ascosphaera apis

Comparison

Pathway

Pathway ID

DEGs-Size

Size

RF

P value

SPE2-SPE1-Dw

Proteasome

tve03050

28

33

1.55

0.014

SPE2-SPE1-Dw

Glycine, serine and threonine metabolism

tve00260

28

36

1.42

0.028

SPE2-SPE1-Dw

Aminoacyl-tRNA biosynthesis

tve00970

31

43

1.31

0.040

SPE2-SPE1-Up

Oxidative phosphorylation

tve00190

6

53

5.28

0.004

SPE3-SPE1-Dw

Proteasome

tve03050

28

33

2.39

0.000

SPE3-SPE1-Dw

SNARE interactions in vesicular transport

tve04130

10

13

2.17

0.045

SPE3-SPE1-Dw

Sulfur metabolism

tve00920

10

13

2.17

0.045

SPE4-SPE1-Dw

Proteasome

tve03050

28

33

2.26

0.001

SPE4-SPE1-Dw

SNARE interactions in vesicular transport

tve04130

11

13

2.25

0.035

SPE4-SPE1-Dw

Fatty acid metabolism

tve01212

17

25

1.81

0.038

SPE4-SPE1-Dw

Fructose and mannose metabolism

tve00051

16

24

1.77

0.048

SPE4-SPE1-Up

Terpenoid backbone biosynthesis

tve00900

4

21

2.35

0.032

SPE4-SPE1-Up

Glycine, serine and threonine metabolism

tve00260

5

36

1.72

0.049

SPE3-SPE2-Dw

Spliceosome

tve03040

12

72

4.36

0.000

SPE3-SPE2-Dw

Oxidative phosphorylation

tve00190

6

53

2.96

0.028

SPE3-SPE2-Dw

Pantothenate and CoA biosynthesis

tve00770

3

16

4.9

0.037

SPE3-SPE2-Dw

Valine, leucine and isoleucine biosynthesis

tve00290

3

16

4.9

0.037

SPE3-SPE2-Dw

Butanoate metabolism

tve00650

3

17

4.61

0.042

SPE3-SPE2-Up

Ribosome biogenesis in eukaryotes

tve03008

54

66

0.95

0.039

SPE3-SPE2-Up

Glycine, serine and threonine metabolism

tve00260

33

36

1.06

0.039

SPE4-SPE3-Dw

Basal transcription factors

tve03022

21

28

1.25

0.049

SPE4-SPE3-Up

Pentose phosphate pathway

tve00030

2

25

3.42

0.025

  1. Up refers to up-regulated pathway and Dw to down-regulated pathway. DEGs-Size, number of differentially expressed genes that contribute to the enrichment of the term. Size, number of expressed genes associated with the term. RF, rich factor.