Table 4 MLR classification accuracy.
From: Differentiation of Hispanic biogeographic ancestry with 80 ancestry informative markers
SNP Panel | Dataset | HUR | DOM | COL | CUB | PUR | PEL | MXL | Overall |
|---|---|---|---|---|---|---|---|---|---|
Setser80 | GOAL | 100% (±0%) | 100% (±0%) | 100% (±0%) | 97.5% (±5%) | 97.5% (±5%) | N/A | N/A | 99% |
Seldin96 | GOAL | 97.5% (±5%) | 95% (±5.8%) | 85% (±12.9%) | 90% (±11.5%) | 95% (±5.8%) | N/A | N/A | 92.5% |
Kidd44 | GOAL | 92.5% (±9.6%) | 90% (±0%) | 75% (±17.3%) | 72.5% (±15%) | 72.5% (±9.6%) | N/A | N/A | 80.5% |
Setser80 | 1000 G | N/A | N/A | 90.4% (±7.4%) | N/A | 90.4% (±7.4%) | 100% (±0%) | 94.2% (±7.4%) | 93.8% |
Seldin96 | 1000 G | N/A | N/A | 94.2% (±3.8%) | N/A | 88.5% (±7.7%) | 100% (±0%) | 92.3% (±6.3%) | 93.8% |
Kidd44 | 1000 G | N/A | N/A | 76.9% (±8.9%) | N/A | 76.9% (±6.3%) | 92.3% (±8.9%) | 82.7% (±9.7%) | 82.2% |
Setser80 | 7 Pops | 95% (±5.8%) | 97.5% (±5%) | 77.5% (±9.6%) | 100% (±0%) | 92.5% (±9.6%) | 100% (±0%) | 90% (±8.2%) | 93.2% |
Seldin96 | 7 Pops | 100% (±0%) | 82.5% (±20.6%) | 82.5% (±12.6%) | 85% (±17.3%) | 67.5% (±17.1%) | 97.5% (±5%) | 100% (±0%) | 87.9% |
Kidd44 | 7 Pops | 57.5% (±9.6%) | 85% (±12.9%) | 55% (±5.8%) | 72.5% (±12.6%) | 55% (±12.9%) | 92.5% (±9.6%) | 82.5% (±9.6%) | 71.4% |
