Table 1 Assembly and sequencing statistics for the activated sludge samples.
Parameter | CK | M |
|---|---|---|
Raw reads | 104,261,932 | 72,952,276 |
Raw bases | 15,743,551,732 | 11,015,793,676 |
Clean reads | 94,231,934 | 65,438,191 |
Clean bases | 14,098,350,576 | 9,791,938,998 |
Metagenomic sequence assembling | Contigs | Scaffolds |
Minimum sequence length (bp) | 200 | 200 |
Maximum sequence length (bp) | 669,717 | 739,536 |
N50 length (bp) | 1,902 | 2,050 |
Total sequences | 444,274 | 67,707 |
Macronomic length (bp) | 532,318,741 | 530,334,523 |
GC base count | 300,608,981 | 299,397,251 |
Sequences of length > 1 kb | 119,179 | 116.148 |
