Table 3 Primer sets used to detect progeny following a cross of transgenic and weedy rice.

From: Performance of hybrids between abiotic stress-tolerant transgenic rice and its weedy relatives under water-stressed conditions

Primer set

Sequence (5′ to 3′)

Amplified size (bp)

Specific to AtCYP78A7 cassette

AtCYP78A7- F

GAT GTT TCC ACC CTA GGC TA

787

AtCYP78A7- R

TTT TCT TGA CGA GGG TTC TA

 

Positive control

RBE4-F

GTT TTA GTT GGG TGA AAG CGG TT

105

RBE4-R

CCT GTT AGT TCT TCC AAT GCC CTT A

 

Zygosity determination

AtCYP78A7- LBcfm R

AAA AGA TGA GGC CTT GAC TG

440

AtCYP78A7-insertion-F1

CGT GTC TGC GTC CAA GTA CA

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