Table 3 Repeat numbers and unit length distribution of putative pure SSR markers in the transcriptome.
Repeat number | Motif length | Total | Percent (%) | |||||
|---|---|---|---|---|---|---|---|---|
mono | Di | Tri | Tetra | Penta | Hexa | |||
5 | 0 | 0 | 3,455 | 227 | 37 | 18 | 3,737 | 6.78 |
6 | 0 | 5,419 | 1,326 | 104 | 8 | 2 | 6,859 | 12.44 |
7 | 0 | 2,815 | 616 | 23 | 6 | 1 | 3,461 | 6.28 |
8 | 0 | 1,878 | 298 | 16 | 1 | 0 | 2,193 | 3.98 |
9 | 0 | 1,301 | 135 | 9 | 1 | 0 | 1,446 | 2.62 |
10 | 9,782 | 1,030 | 71 | 14 | 0 | 0 | 10,897 | 19.76 |
11 | 5,170 | 700 | 37 | 6 | 2 | 0 | 5,915 | 10.73 |
12 | 3,252 | 507 | 17 | 10 | 0 | 0 | 3,786 | 6.87 |
13 | 2,253 | 457 | 17 | 3 | 5 | 0 | 2,735 | 4.96 |
14 | 1,534 | 316 | 3 | 20 | 1 | 0 | 1,874 | 3.40 |
15 | 1,035 | 210 | 12 | 5 | 1 | 1 | 1,264 | 2.29 |
16 | 719 | 195 | 6 | 2 | 1 | 0 | 923 | 1.67 |
17 | 538 | 193 | 3 | 4 | 0 | 0 | 738 | 1.34 |
18 | 435 | 135 | 11 | 6 | 0 | 0 | 587 | 1.06 |
19 | 371 | 87 | 0 | 2 | 2 | 0 | 462 | 0.84 |
≥20 | 7,185 | 1,018 | 7 | 47 | 3 | 0 | 8,260 | 14.98 |
Total | 32,274 | 16,261 | 6,014 | 498 | 68 | 22 | 55,137 | 100.00 |
Percent (%) | 58.53 | 29.49 | 10.91 | 0.90 | 0.12 | 0.04 | 100.00 | |
