Table 1 Demographics and clinical characteristics of ‘combined’ cohort (N = 235).

From: Role of gene signatures combined with pathology in classification of oropharynx head and neck cancer

Characteristic

Number (percentage or range)

Median age in years at diagnosis (range)

57 (35–80)

Number female (%)

32 (13.6%)

HPV status:

 

Overall HPV positive

116 (49%)

Method of HPV status determination‘:

 

HPV RNA positive (RNA seq)

42

HPV DNA (ISH) positive

64

p16 immunohistochemistry (IHC)

10

Negative

98 (46%)

Unknown

11 (5%)

Subsite:

 

Base of tongue

39 (16.5%)

Oropharynx*

142 (60.5%)

Tonsil

54 (23%)

Clinical Stage AJCC 7:

 

I

10 (4.2%)

II

23 (9.7%)

III

33 (13.9%)

IV

18 (7.6%)

IVa

134 (57%)

IVb

13 (5.5%)

IVc

4 (1.7%)

Clinical Stage AJCC 8:

 

I

71 (30%)

II

40 (17%)

III

44 (19%)

IV

9 (4%)

IVa

51 (21.8%)

IVb

4 (2%)

IVc

1 (0.2%)

NA

15 (6%)

Number with more than 10 pack year history (%)

186 (81%)

Median pack years of smokers (IQR)

30 (12–60)

Number of patients receiving radiotherapy (%)

177 (75%)

Number of patients receiving surgery (%)

57 (24%)

Number of patients receiving chemotherapy (%)

110 (47%)

Median follow up (years)

2.34

Number of events (overall survival)

83

Number of events (recurrence free survival)

99

  1. AJCC = American Joint Committee on Cancer.
  2. ‘Method of determination as described by authors of original paper. For details of overlap between different methods, if performed, please see Supplementary Table A4.
  3. *Several series – specifically Walter and Wichmann consisted of 100% ‘oropharynx’ cases with no further definition of subsite (Supplementary Table A1).