Table 3 Characteristics of the Linkage Map obtained by Lep-MAP Software.

From: Construction of a high density linkage map in Oil Palm using SPET markers

LG

Mno

Length

LogL

missPlaced

NoM

Loci

devM

1

188

94.0

−5494.3

10

178

74

7(3)

2

111

85.9

−2735.9

2

109

58

6(5)

3

134

70.4

−2717.8

1

133

52

7(4)

4

289

154.7

−7157.8

9

280

122

17(12)

5

106

64.3

−1739.2

1

105

53

4(1)

6

90

78.8

−2316.0

12

78

49

6(3)

7

119

73.4

−2684.2

8

111

56

5(3)

8

268

128.9

−9723.0

1

267

114

19(11)

9

168

87.9

−4218.2

14

154

75

6(4)

10

86

50.9

−1628.4

5

81

45

10(4)

11

166

113.5

−5322.2

7

159

76

9(5)

12

133

85.4

−3187.7

2

131

59

4(2)

13

138

72.6

−2817.4

4

134

69

10(3)

14

126

66.1

−2742.8

8

118

48

0(0)

15

195

86.4

−5146.8

6

189

69

4(2)

16

71

57.1

−1392.7

0

71

35

1(0)

Sum:

2388

1370.5

 

90

2298

1054

115(62)

Additional LG

17

11

5.8

     

18

7

7.0

     

19

5

9.8

     

20

4

2.1

     
  1. LG: Linkage Group, Mno: marker numbers on each LG, Length: length of the LG [cM], LogL: log likelihood for the given order, NoM: non-misplaced marker numbers (located on different chromosomes on the physical map), Loci: number of shared by one or several markers on the same chromosome but with different locations on the physical map, devM: observed markers on the genetic map, deviated by over one million base pairs (bp) on from the expected order in the physical map; in brackets marker numbers deviated by over two million bp (see text for details).