Figure 3
From: Adipose tissue in health and disease through the lens of its building blocks
Cell Type Specificity of TissueDecoder: Heatmaps of AT21 signature matrix showing (A) cell type composition prediction from CIBERSORT with AT21 signature matrix, (B) the normalized expression of selected conventional markers from literature and (C) the normalized expression of CellMaDe predicted primary markers. The common xaxis above the figure denotes the samples used for annotating cell types from the AT21 signature matrix. CellMaDe and CIBERSORT are both trained with AT21 signature matrix, therefore (A,C) are optimal results for both techniques whereas (B) represents the separation power of conventional markers on the AT21 signature matrix. Green boxes indicate for each cell type (columns) the row with its corresponding marker.
