Table 1 Allele frequencies of the markers investigated in the different study populations (AFR, AMR, EAS, EUR, SAS, and NAT).
Gene | SNP, ID | Reference allele | Frequency in population: | |||||
|---|---|---|---|---|---|---|---|---|
NAT | AFR | AMR | EAS | EUR | SAS | |||
TPMT | rs1142345 | T | 0.873 | 0.933 | 0.942 | 0.978 | 0.971 | 0.982 |
TPMT | rs1800460 | C | 0.946 | 0.997 | 0.959 | 1 | 0.972 | 0.995 |
MTHFR | rs1801133 | G | 0.712 | 0.909 | 0.525 | 0.704 | 0.635 | 0.881 |
MTRR | rs1801394 | A | 0.903 | 0.754 | 0.719 | 0.737 | 0.477 | 0.475 |
MTHFD1 | rs2236225 | G | 0.174 | 0.842 | 0.455 | 0.801 | 0.570 | 0.495 |
GGH | rs1800909 | A | 0.883 | 0.833 | 0.772 | 0.780 | 0.720 | 0.713 |
GGH | rs3758149 | G | 0.581 | 0.833 | 0.772 | 0.780 | 0.721 | 0.713 |
ATIC | rs4673993 | T | 0.323 | 0.905 | 0.693 | 0.706 | 0.686 | 0.509 |
ATIC | rs2372536 | C | 0.336 | 0.934 | 0.691 | 0.707 | 0.683 | 0.507 |
SLCO1B1 | rs2306283 | A | 0.290 | 0.182 | 0.527 | 0.238 | 0.597 | 0.452 |
SLCO1B1 | rs4149056 | T | 0.548 | 0.986 | 0.865 | 0.876 | 0.838 | 0.957 |
CCND1 | rs9344 | G | 0.735 | 0.812 | 0.651 | 0.428 | 0.502 | 0.483 |