Table 6 CodY transcriptional repressor controlled gene transcripts that were upregulated in 4B0 culture due to CodY downregulation.
S. No | Locus_tag | Annotation | LogFC | KEGG pathway |
|---|---|---|---|---|
1 | LLNZ_00730 | Argininosuccinate synthase | 5.7 | Arginine biosynthesis |
2 | LLNZ_10425 | ABC-type oligopeptide transport system, periplasmic component | 5.12 | Peptide uptake |
3 | LLNZ_05325 | Anthranilate phosphoribosyltransferase | 4.98 | Phenylalanine, tyrosine and tryptophan biosynthesis |
4 | LLNZ_05020 | Amidophosphoribosyltransferase | 4.77 | Alanine, aspartate and glutamate metabolism |
5 | LLNZ_05715 | Dihydroorotate dehydrogenase electron transfer subunit | 4.29 | Pyrimidine metabolism |
6 | LLNZ_05720 | Dihydroorotate dehydrogenase 1B | 4.19 | Pyrimidine metabolism |
7 | LLNZ_09690 | Aminopeptidase P | 4.12 | Peptide degradation |
8 | LLNZ_02900 | Phosphoserine aminotransferase | 3.35 | Glycine, serine and threonine metabolism |
9 | LLNZ_03630 | Oligopeptide transport ATP-binding protein oppF | 3 | Peptide uptake |
10 | LLNZ_04835 | Dihydrodipicolinate reductase | 2.1 | Lysine biosynthesis |
