Figure 1
From: A multimodal computational pipeline for 3D histology of the human brain
Workflow of data acquisition (orange) and computational processing (green). The ex vivo brain is scanned, dissected, sectioned and stained, providing data for the pipeline: the MRI volume, the whole and blocked slice photographs (dissection), the blockface photographs (sectioning), and the stained sections. The flowchart illustrates the main steps of the pipeline: stacking of blockface photographs; registration of blockface volumes to slice photographs; blocks initialization; block mosaic-preprocessed MRI alignment; and MRI-histology registration.
